RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 OR10T2Q8NGX3 314 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 HLA-CQ95604 372 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 MAGOHBQ96A72 148 aaKnown RBP10.76□□□□□ -0.69
PHGDH-224ENST00000641711 RTP3Q9BQQ7 232 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 SYT15Q9BQS2 421 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 SMYD3Q9H7B4 428 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 UBE2ZQ9H832 354 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-224ENST00000641711 MAN1C1Q9NR34 630 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 IP6K2Q9UHH9 426 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 FAM50BQ9Y247 325 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 TIMM13Q9Y5L4 95 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-224ENST00000641711 DENND4AQ7Z401 1863 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 C2orf16Q68DN1 1984 aa10.76□□□□□ -0.69
PHGDH-224ENST00000641711 PATJQ8NI35 1801 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 FAM170AA1A519 330 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 MTMR11A4FU01 709 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 TMEM191CA6NGB0 347 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 A8MXQ7 604 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 DAPK3O43293 454 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 MED7O43513 233 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 WEE2P0C1S8 567 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 RARAP10276 462 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 RPL17P18621 184 aaKnown RBP10.75□□□□□ -0.69
PHGDH-224ENST00000641711 BRD2P25440 801 aaKnown RBP10.75□□□□□ -0.69
PHGDH-224ENST00000641711 COILP38432 576 aaPredicted RBP10.75□□□□□ -0.69
PHGDH-224ENST00000641711 MAGEA11P43364 429 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 TUFMP49411 452 aaKnown RBP10.75□□□□□ -0.69
PHGDH-224ENST00000641711 GSCP56915 257 aaPredicted RBP10.75□□□□□ -0.69
PHGDH-224ENST00000641711 MTMR3Q13615 1198 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 PPP1R15BQ5SWA1 713 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 LRRC38Q5VT99 294 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 ANKRD54Q6NXT1 300 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 AADACL2Q6P093 401 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 FAM171BQ6P995 826 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 VSTM1Q6UX27 236 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 SCARA5Q6ZMJ2 495 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 SYDE1Q6ZW31 735 aaPredicted RBP10.75□□□□□ -0.69
PHGDH-224ENST00000641711 RBM23Q86U06 439 aaKnown RBP10.75□□□□□ -0.69
PHGDH-224ENST00000641711 PASD1Q8IV76 773 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 RHOT1Q8IXI2 618 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 KATNAL2Q8IYT4 538 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 CRYBG2Q8N1P7 616 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 WDTC1Q8N5D0 677 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 NIPA2Q8N8Q9 360 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 OR6B3Q8NGW1 331 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 TFAP2BQ92481 460 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 NECTIN4Q96NY8 510 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 ZIM3Q96PE6 472 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 PKMYT1Q99640 499 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 NT5C1AQ9BXI3 368 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 TXLNGYQ9BZA5 131 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 TRIM7Q9C029 511 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 CLDND1Q9NY35 253 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 THEGQ9P2T0 379 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 STRIP2Q9ULQ0 834 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 POLIQ9UNA4 740 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 CEP83Q9Y592 693 aa10.75□□□□□ -0.69
PHGDH-224ENST00000641711 PER2O15055 1255 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 XYLBO75191 536 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 TBX10O75333 385 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 PPFIA2O75334 1257 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 CSPG5O95196 566 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 EPCAMP16422 314 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 CD58P19256 250 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 RAD23BP54727 409 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 SMAD4Q13485 552 aaKnown RBP10.74□□□□□ -0.69
PHGDH-224ENST00000641711 SKIV2LQ15477 1246 aaKnown RBP10.74□□□□□ -0.69
PHGDH-224ENST00000641711 LEXMQ3ZCV2 418 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 EMC10Q5UCC4 262 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 TTC27Q6P3X3 843 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 CCDC137Q6PK04 289 aaKnown RBP10.74□□□□□ -0.69
PHGDH-224ENST00000641711 RSPO2Q6UXX9 243 aaPredicted RBP10.74□□□□□ -0.69
PHGDH-224ENST00000641711 OSTM1Q86WC4 334 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 DDX42Q86XP3 938 aaKnown RBP eCLIP10.74□□□□□ -0.69
PHGDH-224ENST00000641711 LEMD2Q8NC56 503 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 B3GALNT2Q8NCR0 500 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 SMRP1Q8NCR6 262 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 C3orf20Q8ND61 904 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 VN1R2Q8NFZ6 395 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 EXD1Q8NHP7 514 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 MYCBPAPQ8TBZ2 947 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 C18orf8Q96DM3 657 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 MSLNLQ96KJ4 702 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 RUFY1Q96T51 708 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 MRPL45Q9BRJ2 306 aaKnown RBP10.74□□□□□ -0.69
PHGDH-224ENST00000641711 TRIM51Q9BSJ1 452 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 ELOVL4Q9GZR5 314 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 SDCBP2Q9H190 292 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 NEUROG2Q9H2A3 272 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 FAM204AQ9H8W3 233 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 HOMER3Q9NSC5 361 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 ZDHHC18Q9NUE0 388 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 CD207Q9UJ71 328 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 KIAA1257Q9ULG3 409 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 ASB3Q9Y575 518 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 PCDHB5Q9Y5E4 795 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 GREB1Q4ZG55 1949 aa10.74□□□□□ -0.69
PHGDH-224ENST00000641711 DOCK8Q8NF50 2099 aa10.73□□□□□ -0.69
PHGDH-224ENST00000641711 TCRBV7S2A1N4TA0A589 114 aa10.73□□□□□ -0.69
PHGDH-224ENST00000641711 GOLGA6CA6NDK9 693 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms