RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 SPATA31D3P0C874 917 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 PYGMP11217 842 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 YWHAQP27348 245 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 IL1R2P27930 398 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 PCK1P35558 622 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 ALDH1A3P47895 512 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 PITX1P78337 314 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-214ENST00000641314 UBE3AQ05086 875 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 SMTNL2Q2TAL5 461 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 SLC25A52Q3SY17 297 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 ATP13A4Q4VNC1 1196 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 LRRC38Q5VT99 294 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 BTBD8Q5XKL5 378 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 SPATA31D4Q6ZUB0 917 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 CEP112Q8N8E3 955 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 SLC7A14Q8TBB6 771 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 SAMD11Q96NU1 681 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 KLHL5Q96PQ7 755 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 EMILIN2Q9BXX0 1053 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 PBX4Q9BYU1 374 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 NKX2-4Q9H2Z4 354 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 CERS4Q9HA82 394 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 GMIPQ9P107 970 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 HSFX1Q9UBD0 423 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 USP18Q9UMW8 372 aa18.38■□□□□ 0.53
PHGDH-214ENST00000641314 PLXNA3P51805 1871 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 HIDE1A8MVS5 230 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 M0QYT0 321 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 PRPSAP2O60256 369 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 TRUB2O95900 331 aaKnown RBP18.37■□□□□ 0.53
PHGDH-214ENST00000641314 KRT7P08729 469 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 KLRC2P26717 231 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 PGFP49763 221 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 ATXN1P54253 815 aaKnown RBP18.37■□□□□ 0.53
PHGDH-214ENST00000641314 HDAC4P56524 1084 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 ODF2Q5BJF6 829 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 KCNT1Q5JUK3 1230 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 SCD5Q86SK9 330 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 CCDC50Q8IVM0 306 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 KATNAL2Q8IYT4 538 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 ADAM32Q8TC27 787 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 PEBP4Q96S96 227 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 NPY6RQ99463 290 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 TRIM62Q9BVG3 475 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 NMUR1Q9HB89 426 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 MSRAQ9UJ68 235 aa18.37■□□□□ 0.53
PHGDH-214ENST00000641314 LAMA2P24043 3122 aaKnown RBP18.37■□□□□ 0.53
PHGDH-214ENST00000641314 CTAGE15A4D2H0 777 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 C2orf71A6NGG8 1288 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 PI4K2BG5E9Z4 385 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 PGRMC1O00264 195 aaKnown RBP18.36■□□□□ 0.53
PHGDH-214ENST00000641314 TGM5O43548 720 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 CTAGE8P0CG41 777 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 ERVK-21P61565 698 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 TAF10Q12962 218 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 NME3Q13232 169 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 GPM6BQ13491 265 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 OTUD1Q5VV17 481 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-214ENST00000641314 STRADAQ7RTN6 431 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 POLNQ7Z5Q5 900 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 CTAGE6Q86UF2 777 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 MON1AQ86VX9 555 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 CTAGE4Q8IX94 777 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 TCEAL8Q8IYN2 117 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 RASGEF1CQ8N431 466 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 MRPL43Q8N983 215 aaKnown RBP18.36■□□□□ 0.53
PHGDH-214ENST00000641314 HSPH1Q92598 858 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 CENPIQ92674 756 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-214ENST00000641314 RNF25Q96BH1 459 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-214ENST00000641314 NCAPGQ9BPX3 1015 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 FAM204AQ9H8W3 233 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 ABCC13Q9NSE7 274 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 COMMD8Q9NX08 183 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 DDX56Q9NY93 547 aaKnown RBP18.36■□□□□ 0.53
PHGDH-214ENST00000641314 IL37Q9NZH6 218 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 CALCOCO1Q9P1Z2 691 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 RNF14Q9UBS8 474 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 INSL5Q9Y5Q6 135 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 GREB1Q4ZG55 1949 aa18.36■□□□□ 0.53
PHGDH-214ENST00000641314 FGGP02679 453 aa18.35■□□□□ 0.53
PHGDH-214ENST00000641314 IRS1P35568 1242 aa18.35■□□□□ 0.53
PHGDH-214ENST00000641314 DEUP1Q05D60 604 aa18.35■□□□□ 0.53
PHGDH-214ENST00000641314 TWF1Q12792 350 aa18.35■□□□□ 0.53
PHGDH-214ENST00000641314 VEPH1Q14D04 833 aa18.35■□□□□ 0.53
PHGDH-214ENST00000641314 LLGL1Q15334 1064 aa18.35■□□□□ 0.53
PHGDH-214ENST00000641314 RAB30Q15771 203 aa18.35■□□□□ 0.53
PHGDH-214ENST00000641314 TAF12Q16514 161 aa18.35■□□□□ 0.53
PHGDH-214ENST00000641314 ARHGAP18Q8N392 663 aa18.35■□□□□ 0.53
PHGDH-214ENST00000641314 EXD1Q8NHP7 514 aa18.35■□□□□ 0.53
PHGDH-214ENST00000641314 ACTRT1Q8TDG2 376 aa18.35■□□□□ 0.53
PHGDH-214ENST00000641314 NT5C3BQ969T7 300 aa18.35■□□□□ 0.53
PHGDH-214ENST00000641314 RRN3Q9NYV6 651 aa18.35■□□□□ 0.53
PHGDH-214ENST00000641314 MAFFQ9ULX9 164 aa18.35■□□□□ 0.53
PHGDH-214ENST00000641314 IRAK3Q9Y616 596 aa18.35■□□□□ 0.53
PHGDH-214ENST00000641314 ZNF638Q14966 1978 aaKnown RBP18.35■□□□□ 0.53
PHGDH-214ENST00000641314 LRRD1A4D1F6 860 aa18.34■□□□□ 0.53
PHGDH-214ENST00000641314 FSCN2O14926 492 aa18.34■□□□□ 0.53
PHGDH-214ENST00000641314 ZRANB2O95218 330 aaKnown RBP eCLIP18.34■□□□□ 0.53
PHGDH-214ENST00000641314 RARAP10276 462 aa18.34■□□□□ 0.53
PHGDH-214ENST00000641314 RDXP35241 583 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms