RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 HOXC11O43248 304 aaPredicted RBP26.52■■□□□ 1.84
VEGFA-232ENST00000640653 RETP07949 1114 aa26.52■■□□□ 1.84
VEGFA-232ENST00000640653 CD19P15391 556 aa26.52■■□□□ 1.84
VEGFA-232ENST00000640653 PLA2G4AP47712 749 aa26.52■■□□□ 1.84
VEGFA-232ENST00000640653 BCAT1P54687 386 aa26.52■■□□□ 1.84
VEGFA-232ENST00000640653 STX17P56962 302 aa26.52■■□□□ 1.84
VEGFA-232ENST00000640653 MRPS21P82921 87 aaKnown RBP26.52■■□□□ 1.84
VEGFA-232ENST00000640653 GOLGA7BQ2TAP0 167 aa26.52■■□□□ 1.84
VEGFA-232ENST00000640653 C2orf27AQ580R0 203 aa26.52■■□□□ 1.84
VEGFA-232ENST00000640653 PIGZQ86VD9 579 aa26.52■■□□□ 1.84
VEGFA-232ENST00000640653 C12orf40Q86WS4 652 aa26.52■■□□□ 1.84
VEGFA-232ENST00000640653 ARHGAP18Q8N392 663 aa26.52■■□□□ 1.84
VEGFA-232ENST00000640653 GAB3Q8WWW8 586 aa26.52■■□□□ 1.84
VEGFA-232ENST00000640653 WBP2Q969T9 261 aa26.52■■□□□ 1.84
VEGFA-232ENST00000640653 ARHGEF4Q9NR80 690 aa26.52■■□□□ 1.84
VEGFA-232ENST00000640653 POLR3BQ9NW08 1133 aaPredicted RBP26.52■■□□□ 1.84
VEGFA-232ENST00000640653 TSPAN16Q9UKR8 245 aa26.52■■□□□ 1.84
VEGFA-232ENST00000640653 KIAA1257Q9ULG3 409 aa26.52■■□□□ 1.84
VEGFA-232ENST00000640653 RPP40O75818 363 aaKnown RBP26.51■■□□□ 1.83
VEGFA-232ENST00000640653 KAT7O95251 611 aa26.51■■□□□ 1.83
VEGFA-232ENST00000640653 FGFR1OPO95684 399 aaKnown RBP26.51■■□□□ 1.83
VEGFA-232ENST00000640653 APBB3O95704 486 aa26.51■■□□□ 1.83
VEGFA-232ENST00000640653 GRIA2P42262 883 aa26.51■■□□□ 1.83
VEGFA-232ENST00000640653 ANO4Q32M45 955 aa26.51■■□□□ 1.83
VEGFA-232ENST00000640653 RAB41Q5JT25 222 aa26.51■■□□□ 1.83
VEGFA-232ENST00000640653 SCD5Q86SK9 330 aa26.51■■□□□ 1.83
VEGFA-232ENST00000640653 TTC30AQ86WT1 665 aa26.51■■□□□ 1.83
VEGFA-232ENST00000640653 NUDT5Q9UKK9 219 aa26.51■■□□□ 1.83
VEGFA-232ENST00000640653 USP18Q9UMW8 372 aa26.51■■□□□ 1.83
VEGFA-232ENST00000640653 OTOGLQ3ZCN5 2332 aa26.5■■□□□ 1.83
VEGFA-232ENST00000640653 AXIN1O15169 862 aa26.5■■□□□ 1.83
VEGFA-232ENST00000640653 GREM1O60565 184 aa26.5■■□□□ 1.83
VEGFA-232ENST00000640653 CCDC192P0DO97 292 aa26.5■■□□□ 1.83
VEGFA-232ENST00000640653 VDRP11473 427 aa26.5■■□□□ 1.83
VEGFA-232ENST00000640653 KDSRQ06136 332 aa26.5■■□□□ 1.83
VEGFA-232ENST00000640653 PPM1KQ8N3J5 372 aa26.5■■□□□ 1.83
VEGFA-232ENST00000640653 UBR7Q8N806 425 aa26.5■■□□□ 1.83
VEGFA-232ENST00000640653 KIAA1468Q9P260 1216 aa26.5■■□□□ 1.83
VEGFA-232ENST00000640653 GVINP1Q7Z2Y8 2422 aa26.5■■□□□ 1.83
VEGFA-232ENST00000640653 A0A0A0MRY4 1105 aa26.49■■□□□ 1.83
VEGFA-232ENST00000640653 XPO1O14980 1071 aaKnown RBP26.49■■□□□ 1.83
VEGFA-232ENST00000640653 MDM4O15151 490 aa26.49■■□□□ 1.83
VEGFA-232ENST00000640653 LRP3O75074 770 aa26.49■■□□□ 1.83
VEGFA-232ENST00000640653 TNFRSF4P43489 277 aa26.49■■□□□ 1.83
VEGFA-232ENST00000640653 MARSP56192 900 aaKnown RBP26.49■■□□□ 1.83
VEGFA-232ENST00000640653 BST2Q10589 180 aaKnown RBP26.49■■□□□ 1.83
VEGFA-232ENST00000640653 HSF5Q4G112 596 aaPredicted RBP26.49■■□□□ 1.83
VEGFA-232ENST00000640653 NUDT18Q6ZVK8 323 aa26.49■■□□□ 1.83
VEGFA-232ENST00000640653 CACNA2D4Q7Z3S7 1137 aa26.49■■□□□ 1.83
VEGFA-232ENST00000640653 TMEM25Q86YD3 366 aa26.49■■□□□ 1.83
VEGFA-232ENST00000640653 TRIM59Q8IWR1 403 aa26.49■■□□□ 1.83
VEGFA-232ENST00000640653 NAT16Q8N8M0 369 aa26.49■■□□□ 1.83
VEGFA-232ENST00000640653 TSTD1Q8NFU3 115 aa26.49■■□□□ 1.83
VEGFA-232ENST00000640653 SRRTQ9BXP5 876 aaKnown RBP26.49■■□□□ 1.83
VEGFA-232ENST00000640653 DEC1Q9P2X7 70 aa26.49■■□□□ 1.83
VEGFA-232ENST00000640653 EBF1Q9UH73 591 aa26.49■■□□□ 1.83
VEGFA-232ENST00000640653 MMP17Q9ULZ9 603 aa26.49■■□□□ 1.83
VEGFA-232ENST00000640653 PCDHB4Q9Y5E5 795 aa26.49■■□□□ 1.83
VEGFA-232ENST00000640653 PAEPP09466 180 aa26.48■■□□□ 1.83
VEGFA-232ENST00000640653 TKTL1P51854 596 aa26.48■■□□□ 1.83
VEGFA-232ENST00000640653 PDE4CQ08493 712 aa26.48■■□□□ 1.83
VEGFA-232ENST00000640653 KCNH2Q12809 1159 aa26.48■■□□□ 1.83
VEGFA-232ENST00000640653 CAMK4Q16566 473 aa26.48■■□□□ 1.83
VEGFA-232ENST00000640653 TMEM270Q6UE05 265 aa26.48■■□□□ 1.83
VEGFA-232ENST00000640653 MIB1Q86YT6 1006 aa26.48■■□□□ 1.83
VEGFA-232ENST00000640653 ETFBKMTQ8IXQ9 262 aa26.48■■□□□ 1.83
VEGFA-232ENST00000640653 FAM160A2Q8N612 972 aaPredicted RBP26.48■■□□□ 1.83
VEGFA-232ENST00000640653 LRRC4Q9HBW1 653 aa26.48■■□□□ 1.83
VEGFA-232ENST00000640653 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.48■■□□□ 1.831e-11■□□□□ 9.4
VEGFA-232ENST00000640653 KIAA1549LQ6ZVL6 1849 aa26.48■■□□□ 1.83
VEGFA-232ENST00000640653 EP300Q09472 2414 aaPredicted RBP26.47■■□□□ 1.83
VEGFA-232ENST00000640653 TULP3O75386 442 aa26.47■■□□□ 1.83
VEGFA-232ENST00000640653 ZBED1O96006 694 aa26.47■■□□□ 1.83
VEGFA-232ENST00000640653 AFPP02771 609 aaKnown RBP26.47■■□□□ 1.83
VEGFA-232ENST00000640653 SETSIPP0DME0 302 aa26.47■■□□□ 1.83
VEGFA-232ENST00000640653 COG7P83436 770 aa26.47■■□□□ 1.83
VEGFA-232ENST00000640653 LMNB2Q03252 620 aa26.47■■□□□ 1.83
VEGFA-232ENST00000640653 SPEM2Q0P670 501 aa26.47■■□□□ 1.83
VEGFA-232ENST00000640653 MESP2Q0VG99 397 aa26.47■■□□□ 1.83
VEGFA-232ENST00000640653 RSRC2Q7L4I2 434 aaKnown RBP26.47■■□□□ 1.83
VEGFA-232ENST00000640653 PHTF2Q8N3S3 785 aa26.47■■□□□ 1.83
VEGFA-232ENST00000640653 LMO3Q8TAP4 145 aa26.47■■□□□ 1.83
VEGFA-232ENST00000640653 RMDN1Q96DB5 314 aa26.47■■□□□ 1.83
VEGFA-232ENST00000640653 XPO6Q96QU8 1125 aaKnown RBP26.47■■□□□ 1.83
VEGFA-232ENST00000640653 WDR35Q9P2L0 1181 aa26.47■■□□□ 1.83
VEGFA-232ENST00000640653 RASAL2Q9UJF2 1139 aa26.47■■□□□ 1.83
VEGFA-232ENST00000640653 ZNF510Q9Y2H8 683 aa26.47■■□□□ 1.83
VEGFA-232ENST00000640653 FRYLO94915 3013 aa26.47■■□□□ 1.83
VEGFA-232ENST00000640653 TBC1D3BA6NDS4 549 aa26.46■■□□□ 1.83
VEGFA-232ENST00000640653 O00370 1275 aa26.46■■□□□ 1.83
VEGFA-232ENST00000640653 TGM1P22735 817 aa26.46■■□□□ 1.83
VEGFA-232ENST00000640653 TIE1P35590 1138 aa26.46■■□□□ 1.83
VEGFA-232ENST00000640653 YWHAGP61981 247 aaKnown RBP eCLIP26.46■■□□□ 1.83
VEGFA-232ENST00000640653 EFEMP1Q12805 493 aa26.46■■□□□ 1.83
VEGFA-232ENST00000640653 PM20D1Q6GTS8 502 aa26.46■■□□□ 1.83
VEGFA-232ENST00000640653 CCDC33Q8N5R6 958 aa26.46■■□□□ 1.83
VEGFA-232ENST00000640653 EHBP1Q8NDI1 1231 aa26.46■■□□□ 1.83
VEGFA-232ENST00000640653 BBS2Q9BXC9 721 aa26.46■■□□□ 1.83
VEGFA-232ENST00000640653 ULBP1Q9BZM6 244 aa26.46■■□□□ 1.83
VEGFA-232ENST00000640653 PARD6AQ9NPB6 346 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms