RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	TUBA4A	P68366	448 aa		11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	CDKL1	Q00532	357 aa		11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	GCNT1	Q02742	428 aa		11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	TFDP3	Q5H9I0	405 aa		11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	PLA2G4F	Q68DD2	849 aa		11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	DAW1	Q8N136	415 aa		11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	TRIML2	Q8N7C3	387 aa		11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	SCAI	Q8N9R8	606 aa		11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	VCPIP1	Q96JH7	1222 aa		11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	PPP1R10	Q96QC0	940 aa	Known RBP	11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	RANBP9	Q96S59	729 aa		11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	C11orf70	Q9BRQ4	267 aa		11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	EIF2A	Q9BY44	585 aa	Known RBP	11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	C20orf27	Q9GZN8	174 aa		11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	KCNQ5	Q9NR82	932 aa		11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	SELENON	Q9NZV5	590 aa		11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	XPO7	Q9UIA9	1087 aa	Known RBP	11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	CNOT11	Q9UKZ1	510 aa	Known RBP	11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	ZNRF3	Q9ULT6	936 aa		11.5	□□□□□ -0.57
STRADA-231	ENST00000638708	ZBTB39	O15060	712 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	BAIAP3	O94812	1187 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	CALCA	P01258	141 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	C8B	P07358	591 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	PSMC3	P17980	439 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	ELK3	P41970	407 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	PRELP	P51888	382 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	RHBDL3	P58872	404 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	ZYX	Q15942	572 aa	Known RBP	11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	ZFYVE27	Q5T4F4	411 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	DCDC5	Q6ZRR9	648 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	FBXL13	Q8NEE6	735 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	ZSWIM2	Q8NEG5	633 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	PIWIL2	Q8TC59	973 aa	Known RBP	11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	TFB1M	Q8WVM0	346 aa	Known RBP	11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	NLRP7	Q8WX94	980 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	ZNF778	Q96MU6	729 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	TRIM56	Q9BRZ2	755 aa	Known RBP	11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	TCHP	Q9BT92	498 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	LIN28A	Q9H9Z2	209 aa	Known RBP	11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	TRPV5	Q9NQA5	729 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	STK39	Q9UEW8	545 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	CDH7	Q9ULB5	785 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	PRPF19	Q9UMS4	504 aa	Known RBP	11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	ARHGAP26	Q9UNA1	814 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	PCDHB2	Q9Y5E7	798 aa		11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.49	□□□□□ -0.57
STRADA-231	ENST00000638708	ARHGEF35	A5YM69	484 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	TLR3	O15455	904 aa	Known RBP	11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	TRPA1	O75762	1119 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	OCM2	P0CE71	109 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	OCM	P0CE72	109 aa	Predicted RBP	11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	RPL22	P35268	128 aa	Known RBP	11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	TXNL4A	P83876	142 aa	Known RBP	11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	MAP7D1	Q3KQU3	841 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	ATP13A4	Q4VNC1	1196 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	C2CD6	Q53TS8	623 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	SLC10A5	Q5PT55	438 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	RC3H1	Q5TC82	1133 aa	Known RBP	11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	LGSN	Q5TDP6	509 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	PDPK2P	Q6A1A2	396 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	PPP1R2P3	Q6NXS1	205 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	OTOP1	Q7RTM1	612 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	PHF13	Q86YI8	300 aa	Predicted RBP	11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	IGDCC3	Q8IVU1	814 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	FEZF2	Q8TBJ5	459 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	PPP4R1	Q8TF05	950 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	CASP10	Q92851	521 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	ARHGEF1	Q92888	912 aa	Known RBP	11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	SNX27	Q96L92	541 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	SENP7	Q9BQF6	1050 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	RTKN	Q9BST9	563 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	APOL6	Q9BWW8	343 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	VPS45	Q9NRW7	570 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	DDX56	Q9NY93	547 aa	Known RBP	11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	BCAP29	Q9UHQ4	241 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	CLEC11A	Q9Y240	323 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	DNAJC16	Q9Y2G8	782 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	TTLL3	Q9Y4R7	772 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	IGLV3-22	A0A075B6J6	115 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	TCRBV7S3A2	A0A539	114 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708		H0YJX3	145 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	CYB561D2	O14569	222 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	MAFG	O15525	162 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	RFPL1	O75677	317 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	PSMD10	O75832	226 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	C1QA	P02745	245 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	GSTT2	P0CG29	244 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	GSTT2B	P0CG30	244 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	CDKN2B	P42772	138 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	YWHAG	P61981	247 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	NOMO3	P69849	1222 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	KCNC4	Q03721	635 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	CBLB	Q13191	982 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	ACAP1	Q15027	740 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	NIPAL1	Q6NVV3	410 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	FRMD7	Q6ZUT3	714 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	TAS1R2	Q8TE23	839 aa		11.48	□□□□□ -0.57
STRADA-231	ENST00000638708	DLG3	Q92796	817 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms