RNA–Protein interactions for RNA: ENST00000638295.1

SCARB2-207, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-207ENST00000638295 STAT4Q14765 748 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 EFL1Q7Z2Z2 1120 aaKnown RBP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 RASSF3Q86WH2 238 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 HERVK_113Q902F9 699 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 GPR88Q9GZN0 384 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 CARD9Q9H257 536 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 GOLPH3Q9H4A6 298 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 AIPL1Q9NZN9 384 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 COL20A1Q9P218 1284 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 DRG1Q9Y295 367 aaKnown RBP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 MORC2Q9Y6X9 1032 aaPredicted RBP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 C1QTNF3-AMACRE9PGA6 284 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 FOXN3O00409 490 aaPredicted RBP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 CTIFO43310 598 aaKnown RBP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 LTFP02788 710 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 ERBB2P04626 1255 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 APRTP07741 180 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 CYP2A6P11509 494 aaPredicted RBP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 HDCP19113 662 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 CYP3A5P20815 502 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 OR1D2P34982 312 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 SPRP35270 261 aaPredicted RBP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 C2orf54Q08AI8 447 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 PDIA2Q13087 525 aaKnown RBP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 BYSLQ13895 437 aaKnown RBP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 ACAD11Q709F0 780 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 SERINC5Q86VE9 423 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 LRRC49Q8IUZ0 686 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 FLCNQ8NFG4 579 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 PTPRN2Q92932 1015 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 VCX3AQ9NNX9 186 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 MARCH2Q9P0N8 246 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 DNMT3LQ9UJW3 386 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 DNPEPQ9ULA0 475 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 COG5Q9UP83 839 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 MYH2Q9UKX2 1941 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 SYN3O14994 580 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 CNMDO75829 334 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 SERPINF2P08697 491 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 ZNF211Q13398 564 aaPredicted RBP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 HIST2H2ACQ16777 129 aaPredicted RBP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 HIST2H2AA3Q6FI13 130 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 TAPT1Q6NXT6 567 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 NLRP9Q7RTR0 991 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 CMTR2Q8IYT2 770 aaKnown RBP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 C17orf53Q8N3J3 647 aaPredicted RBP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 LEMD2Q8NC56 503 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 FAM172AQ8WUF8 416 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 EXT2Q93063 718 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 EML4Q9HC35 981 aaKnown RBP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 SCUBE2Q9NQ36 999 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 TBC1D13Q9NVG8 400 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 NMRK1Q9NWW6 199 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 TTC7AQ9ULT0 858 aaPredicted RBP6.89□□□□□ -1.31
SCARB2-207ENST00000638295 SPACA6W5XKT8 324 aa6.89□□□□□ -1.31
SCARB2-207ENST00000638295 CLUHO75153 1309 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 TBC1D3BA6NDS4 549 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 RBAK-RBAKDNI3L0D1 243 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 PHF2O75151 1096 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 USP17L7P0C7H9 530 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 PLA2G4AP47712 749 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 SESN2P58004 480 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-207ENST00000638295 PFKPQ01813 784 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 GRIN1Q05586 938 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 ITGB3BPQ13352 177 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-207ENST00000638295 CNGA2Q16280 664 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 FSCBQ5H9T9 825 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 FAM46CQ5VWP2 391 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 GAS2L3Q86XJ1 694 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 SIAH1Q8IUQ4 282 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 CDC26Q8NHZ8 85 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 USP33Q8TEY7 942 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 POF1BQ8WVV4 589 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 POPDC2Q9HBU9 364 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 MRPL40Q9NQ50 206 aaKnown RBP6.88□□□□□ -1.31
SCARB2-207ENST00000638295 PDLIM7Q9NR12 457 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 PKD2L2Q9NZM6 624 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 TPX2Q9ULW0 747 aaKnown RBP6.88□□□□□ -1.31
SCARB2-207ENST00000638295 AP4E1Q9UPM8 1137 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 TIMM13Q9Y5L4 95 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-207ENST00000638295 ALG6Q9Y672 507 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 ARHGAP10A1A4S6 786 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 H2AFYO75367 372 aaKnown RBP6.88□□□□□ -1.31
SCARB2-207ENST00000638295 ADH1CP00326 375 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 PPP3CCP48454 512 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 CASP4P49662 377 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 RABGGTBP53611 331 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 PHLDB3Q6NSJ2 640 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 TMEM161BQ8NDZ6 487 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 IPMKQ8NFU5 416 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 MAFAQ8NHW3 353 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-207ENST00000638295 ETNPPLQ8TBG4 499 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 ZNF606Q8WXB4 792 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 AGAP3Q96P47 875 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 VAT1Q99536 393 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 SUDS3Q9H7L9 328 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-207ENST00000638295 PYCARDQ9ULZ3 195 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 ADAMTS5Q9UNA0 930 aa6.88□□□□□ -1.31
SCARB2-207ENST00000638295 TRIM33Q9UPN9 1127 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms