RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 PCDHB4Q9Y5E5 795 aa17.63■□□□□ 0.41
CACNA1A-259ENST00000638114 AFPP02771 609 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 VDRP11473 427 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 EIF2DP41214 584 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 SLC6A11P48066 632 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 PXNP49023 591 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 GAD2Q05329 585 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 PDE4CQ08493 712 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 BST2Q10589 180 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 SIM2Q14190 667 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 KLHDC10Q6PID8 442 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 WDR5BQ86VZ2 330 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 C12orf40Q86WS4 652 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 KIAA2013Q8IYS2 634 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 CCDC26Q8TAB7 109 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 LMO3Q8TAP4 145 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 KAT5Q92993 513 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 HHIPQ96QV1 700 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 PNKPQ96T60 521 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 CLIC5Q9NZA1 410 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 RWDD2AQ9UIY3 292 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 KIAA1549LQ6ZVL6 1849 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 SPTBN4Q9H254 2564 aa17.62■□□□□ 0.41
CACNA1A-259ENST00000638114 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 K7EQS6 105 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 TULP2O00295 520 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 O00370 1275 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 XPO1O14980 1071 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 HRO43593 1189 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 APODP05090 189 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 PAEPP09466 180 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 CNR2P34972 360 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 PLA2G4AP47712 749 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 TKTL1P51854 596 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 KDSRQ06136 332 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 ANO4Q32M45 955 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 C2orf27AQ580R0 203 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 RAB41Q5JT25 222 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 BTBD8Q5XKL5 378 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 HTR3DQ70Z44 454 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 CEP68Q76N32 757 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 RRAGAQ7L523 313 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 MIB1Q86YT6 1006 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 CREBRFQ8IUR6 639 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 ARHGEF19Q8IW93 802 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 ARHGAP18Q8N392 663 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 EHBP1Q8NDI1 1231 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 UBA3Q8TBC4 463 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 CDK5RAP1Q96SZ6 601 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 ULBP1Q9BZM6 244 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 CLSTN2Q9H4D0 955 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 LRRC4Q9HBW1 653 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 ARHGEF4Q9NR80 690 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 SPHK2Q9NRA0 654 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 RASAL2Q9UJF2 1139 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 GMEB2Q9UKD1 530 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 KIAA1257Q9ULG3 409 aa17.61■□□□□ 0.41
CACNA1A-259ENST00000638114 HOXC11O43248 304 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 GREM1O60565 184 aa17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 KAT7O95251 611 aa17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 ZBED1O96006 694 aa17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 YWHAGP61981 247 aaKnown RBP eCLIP17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 MESP2Q0VG99 397 aa17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 DMC1Q14565 340 aa17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 RSRC2Q7L4I2 434 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 SYT13Q7L8C5 426 aa17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 TMEM25Q86YD3 366 aa17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 SFTPA1Q8IWL2 248 aa17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 CAMKK1Q8N5S9 505 aa17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 NAT16Q8N8M0 369 aa17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 USP33Q8TEY7 942 aa17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 CNOT6LQ96LI5 555 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 INTS2Q9H0H0 1204 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-259ENST00000638114 ANTXRLA6NF34 631 aa17.59■□□□□ 0.41
CACNA1A-259ENST00000638114 RNF225M0QZC1 329 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-259ENST00000638114 SETSIPP0DME0 302 aa17.59■□□□□ 0.41
CACNA1A-259ENST00000638114 BRD2P25440 801 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-259ENST00000638114 GCNT1Q02742 428 aa17.59■□□□□ 0.41
CACNA1A-259ENST00000638114 ADIGQ0VDE8 80 aa17.59■□□□□ 0.41
CACNA1A-259ENST00000638114 EFEMP1Q12805 493 aa17.59■□□□□ 0.41
CACNA1A-259ENST00000638114 LAIR1Q6GTX8 287 aa17.59■□□□□ 0.41
CACNA1A-259ENST00000638114 ZNF276Q8N554 614 aa17.59■□□□□ 0.41
CACNA1A-259ENST00000638114 MLKLQ8NB16 471 aa17.59■□□□□ 0.41
CACNA1A-259ENST00000638114 RBBP8NLQ8NC74 664 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-259ENST00000638114 TFAP2BQ92481 460 aa17.59■□□□□ 0.41
CACNA1A-259ENST00000638114 NDRG1Q92597 394 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-259ENST00000638114 IPO9Q96P70 1041 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-259ENST00000638114 CCDC163A0A0D9SF12 145 aa17.58■□□□□ 0.4
CACNA1A-259ENST00000638114 NEDD8-MDP1E9PL57 170 aa17.58■□□□□ 0.4
CACNA1A-259ENST00000638114 STC2O76061 302 aa17.58■□□□□ 0.4
CACNA1A-259ENST00000638114 APBB3O95704 486 aa17.58■□□□□ 0.4
CACNA1A-259ENST00000638114 HMBSP08397 361 aa17.58■□□□□ 0.4
CACNA1A-259ENST00000638114 GRIA2P42262 883 aa17.58■□□□□ 0.4
CACNA1A-259ENST00000638114 MRPS21P82921 87 aaKnown RBP17.58■□□□□ 0.4
CACNA1A-259ENST00000638114 TPD52L1Q16890 204 aaPredicted RBP17.58■□□□□ 0.4
CACNA1A-259ENST00000638114 PM20D1Q6GTS8 502 aa17.58■□□□□ 0.4
CACNA1A-259ENST00000638114 LCLAT1Q6UWP7 414 aa17.58■□□□□ 0.4
CACNA1A-259ENST00000638114 TPGS1Q6ZTW0 290 aa17.58■□□□□ 0.4
CACNA1A-259ENST00000638114 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.58■□□□□ 0.4
CACNA1A-259ENST00000638114 ETFBKMTQ8IXQ9 262 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms