RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TRPV3Q8NET8 790 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 NEK7Q8TDX7 302 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 PIK3R5Q8WYR1 880 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 CGRRF1Q99675 332 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 OSBPL5Q9H0X9 879 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 RNPEPQ9H4A4 650 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 COMMD8Q9NX08 183 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 GGT7Q9UJ14 662 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 TMEM2Q9UHN6 1383 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ANO9A1A5B4 782 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 FAM196BA6NMK8 535 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 GLP2RO95838 553 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 KRT6AP02538 564 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 KRT6BP04259 564 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 CBX5P45973 191 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 GCLCP48506 637 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 KRT6CP48668 564 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 RCAN1P53805 252 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ATN1P54259 1190 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 DENND1BQ6P3S1 775 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 PI16Q6UXB8 463 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 C11orf57Q6ZUT1 292 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 LEMD2Q8NC56 503 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 RBBP8NLQ8NC74 664 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 SLC30A5Q8TAD4 765 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 STARD13Q9Y3M8 1113 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 SAMD9Q5K651 1589 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 PZPP20742 1482 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 NLRP1Q9C000 1473 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 URADA6NGE7 173 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 PDXKO00764 312 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 AVILO75366 819 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ATP5BP06576 529 aaKnown RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 HOXC6P09630 235 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 OR56A5P0C7T3 313 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 YY1P25490 414 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 DNAJB2P25686 324 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 SERPINB8P50452 374 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ITGA1P56199 1179 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 PRKCEQ02156 737 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 PTPN12Q05209 780 aaKnown RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 LRRC36Q1X8D7 754 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 XRRA1Q6P2D8 792 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 ATG16L2Q8NAA4 619 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 FAM167BQ9BTA0 163 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 METTL5Q9NRN9 209 aaKnown RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 TMEM260Q9NX78 707 aa5.72□□□□□ -1.49
SCN1A-209ENST00000635750 UBA2Q9UBT2 640 aaPredicted RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 UBQLN1Q9UMX0 589 aaKnown RBP5.72□□□□□ -1.49
SCN1A-209ENST00000635750 METP08581 1390 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 IFNA16P05015 189 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 ANXA5P08758 320 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 WEE2P0C1S8 567 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 RRM1P23921 792 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 HNRNPH2P55795 449 aaKnown RBP5.71□□□□□ -1.49
SCN1A-209ENST00000635750 TXNRD1Q16881 649 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 SMU1Q2TAY7 513 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 USP41Q3LFD5 358 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 TAF2Q6P1X5 1199 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 RNF44Q7L0R7 432 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 SPATA21Q7Z572 469 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF589Q86UQ0 364 aaPredicted RBP5.71□□□□□ -1.49
SCN1A-209ENST00000635750 SLC22A9Q8IVM8 553 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 DSELQ8IZU8 1212 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 CCDC185Q8N715 623 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 RASGEF1AQ8N9B8 481 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 UBA3Q8TBC4 463 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 PIGBQ92521 554 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 KCNB2Q92953 911 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 HMG20AQ9NP66 347 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 RCOR1Q9UKL0 485 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 SUPT7LO94864 414 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 RASA1P20936 1047 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 GGCXP38435 758 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 CREMQ03060 361 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 LAYNQ6UX15 382 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 KLHL23Q8NBE8 558 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 GPRASP2Q96D09 838 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 RBM15Q96T37 977 aaKnown RBP eCLIP5.71□□□□□ -1.49
SCN1A-209ENST00000635750 TMEM51Q9NW97 253 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 GGA3Q9NZ52 723 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 CLASP1Q7Z460 1538 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 ARHGAP31Q2M1Z3 1444 aa5.71□□□□□ -1.49
SCN1A-209ENST00000635750 CPDO75976 1380 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 A0A0G2JLW4 131 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 CYB561D2O14569 222 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 SLC9A3R1O14745 358 aaPredicted RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 TIMM44O43615 452 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 OR10H2O60403 315 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 CDH16O75309 829 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 GCATO75600 419 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 ITGB6P18564 788 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 RPL9P32969 192 aaKnown RBP5.71□□□□□ -1.5
SCN1A-209ENST00000635750 CCDC144BQ3MJ40 725 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 ATP13A4Q4VNC1 1196 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 FAAH2Q6GMR7 532 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 FAM171BQ6P995 826 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 KLHL17Q6TDP4 642 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 LONP2Q86WA8 852 aa5.71□□□□□ -1.5
SCN1A-209ENST00000635750 OSBP2Q969R2 916 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms