RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 SPHK2Q9NRA0 654 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 C2orf42Q9NWW7 574 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 OSER1Q9NX31 292 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 GMEB2Q9UKD1 530 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 TSPAN16Q9UKR8 245 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 GVINP1Q7Z2Y8 2422 aa19.22■□□□□ 0.67
CLN6-210ENST00000635747 SCAMP3O14828 347 aaKnown RBP19.21■□□□□ 0.67
CLN6-210ENST00000635747 HOXC11O43248 304 aaPredicted RBP19.21■□□□□ 0.67
CLN6-210ENST00000635747 APODP05090 189 aa19.21■□□□□ 0.67
CLN6-210ENST00000635747 SETSIPP0DME0 302 aa19.21■□□□□ 0.67
CLN6-210ENST00000635747 IRF1P10914 325 aa19.21■□□□□ 0.67
CLN6-210ENST00000635747 COG7P83436 770 aa19.21■□□□□ 0.67
CLN6-210ENST00000635747 GCNT1Q02742 428 aa19.21■□□□□ 0.67
CLN6-210ENST00000635747 BST2Q10589 180 aaKnown RBP19.21■□□□□ 0.67
CLN6-210ENST00000635747 SIM2Q14190 667 aaPredicted RBP19.21■□□□□ 0.67
CLN6-210ENST00000635747 GOLGA7BQ2TAP0 167 aa19.21■□□□□ 0.67
CLN6-210ENST00000635747 LY6G5CQ5SRR4 150 aa19.21■□□□□ 0.67
CLN6-210ENST00000635747 HEATR6Q6AI08 1181 aaKnown RBP19.21■□□□□ 0.67
CLN6-210ENST00000635747 LAIR1Q6GTX8 287 aa19.21■□□□□ 0.67
CLN6-210ENST00000635747 PKN3Q6P5Z2 889 aa19.21■□□□□ 0.67
CLN6-210ENST00000635747 TMEM270Q6UE05 265 aa19.21■□□□□ 0.67
CLN6-210ENST00000635747 BBS7Q8IWZ6 715 aa19.21■□□□□ 0.67
CLN6-210ENST00000635747 ZNF510Q9Y2H8 683 aa19.21■□□□□ 0.67
CLN6-210ENST00000635747 PCDHB4Q9Y5E5 795 aa19.21■□□□□ 0.67
CLN6-210ENST00000635747 A0A0A0MRY4 1105 aa19.2■□□□□ 0.66
CLN6-210ENST00000635747 K7EQS6 105 aa19.2■□□□□ 0.66
CLN6-210ENST00000635747 HRO43593 1189 aa19.2■□□□□ 0.66
CLN6-210ENST00000635747 GRIA2P42262 883 aa19.2■□□□□ 0.66
CLN6-210ENST00000635747 TNFRSF4P43489 277 aa19.2■□□□□ 0.66
CLN6-210ENST00000635747 MRPS21P82921 87 aaKnown RBP19.2■□□□□ 0.66
CLN6-210ENST00000635747 DMWDQ09019 674 aa19.2■□□□□ 0.66
CLN6-210ENST00000635747 HSF5Q4G112 596 aaPredicted RBP19.2■□□□□ 0.66
CLN6-210ENST00000635747 PM20D1Q6GTS8 502 aa19.2■□□□□ 0.66
CLN6-210ENST00000635747 PRR23BQ6ZRT6 265 aa19.2■□□□□ 0.66
CLN6-210ENST00000635747 SCD5Q86SK9 330 aa19.2■□□□□ 0.66
CLN6-210ENST00000635747 TTC30AQ86WT1 665 aa19.2■□□□□ 0.66
CLN6-210ENST00000635747 LMO3Q8TAP4 145 aa19.2■□□□□ 0.66
CLN6-210ENST00000635747 USP33Q8TEY7 942 aa19.2■□□□□ 0.66
CLN6-210ENST00000635747 EZH1Q92800 747 aaPredicted RBP19.2■□□□□ 0.66
CLN6-210ENST00000635747 LRRC4Q9HBW1 653 aa19.2■□□□□ 0.66
CLN6-210ENST00000635747 ARHGEF4Q9NR80 690 aa19.2■□□□□ 0.66
CLN6-210ENST00000635747 OTOGLQ3ZCN5 2332 aa19.19■□□□□ 0.66
CLN6-210ENST00000635747 DMXL1Q9Y485 3027 aa19.19■□□□□ 0.66
CLN6-210ENST00000635747 KAT7O95251 611 aa19.19■□□□□ 0.66
CLN6-210ENST00000635747 ZBED1O96006 694 aa19.19■□□□□ 0.66
CLN6-210ENST00000635747 TKTL1P51854 596 aa19.19■□□□□ 0.66
CLN6-210ENST00000635747 PDE4CQ08493 712 aa19.19■□□□□ 0.66
CLN6-210ENST00000635747 DMC1Q14565 340 aa19.19■□□□□ 0.66
CLN6-210ENST00000635747 LCLAT1Q6UWP7 414 aa19.19■□□□□ 0.66
CLN6-210ENST00000635747 CEP68Q76N32 757 aa19.19■□□□□ 0.66
CLN6-210ENST00000635747 KIAA2013Q8IYS2 634 aa19.19■□□□□ 0.66
CLN6-210ENST00000635747 FAM81BQ96LP2 452 aa19.19■□□□□ 0.66
CLN6-210ENST00000635747 DCLK3Q9C098 648 aa19.19■□□□□ 0.66
CLN6-210ENST00000635747 WDR35Q9P2L0 1181 aa19.19■□□□□ 0.66
CLN6-210ENST00000635747 DEC1Q9P2X7 70 aa19.19■□□□□ 0.66
CLN6-210ENST00000635747 STRIP2Q9ULQ0 834 aa19.19■□□□□ 0.66
CLN6-210ENST00000635747 O00370 1275 aa19.18■□□□□ 0.66
CLN6-210ENST00000635747 GREM1O60565 184 aa19.18■□□□□ 0.66
CLN6-210ENST00000635747 APBB3O95704 486 aa19.18■□□□□ 0.66
CLN6-210ENST00000635747 SLC6A11P48066 632 aa19.18■□□□□ 0.66
CLN6-210ENST00000635747 YWHAGP61981 247 aaKnown RBP eCLIP19.18■□□□□ 0.66
CLN6-210ENST00000635747 CNGA2Q16280 664 aa19.18■□□□□ 0.66
CLN6-210ENST00000635747 ANO4Q32M45 955 aa19.18■□□□□ 0.66
CLN6-210ENST00000635747 CLEC17AQ6ZS10 378 aa19.18■□□□□ 0.66
CLN6-210ENST00000635747 RSRC2Q7L4I2 434 aaKnown RBP19.18■□□□□ 0.66
CLN6-210ENST00000635747 TMEM25Q86YD3 366 aa19.18■□□□□ 0.66
CLN6-210ENST00000635747 DCLK2Q8N568 766 aa19.18■□□□□ 0.66
CLN6-210ENST00000635747 KCNV2Q8TDN2 545 aa19.18■□□□□ 0.66
CLN6-210ENST00000635747 KCTD13Q8WZ19 329 aa19.18■□□□□ 0.66
CLN6-210ENST00000635747 IPO9Q96P70 1041 aaKnown RBP19.18■□□□□ 0.66
CLN6-210ENST00000635747 XPO6Q96QU8 1125 aaKnown RBP19.18■□□□□ 0.66
CLN6-210ENST00000635747 CLSTN2Q9H4D0 955 aa19.18■□□□□ 0.66
CLN6-210ENST00000635747 OLA1Q9NTK5 396 aaKnown RBP19.18■□□□□ 0.66
CLN6-210ENST00000635747 EBF1Q9UH73 591 aa19.18■□□□□ 0.66
CLN6-210ENST00000635747 NUDT5Q9UKK9 219 aa19.18■□□□□ 0.66
CLN6-210ENST00000635747 GPR179Q6PRD1 2367 aa19.18■□□□□ 0.66
CLN6-210ENST00000635747 LRP3O75074 770 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 RETP07949 1114 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 SEC13P55735 322 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 TPD52L1Q16890 204 aaPredicted RBP19.17■□□□□ 0.66
CLN6-210ENST00000635747 C2orf27AQ580R0 203 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 RRAGAQ7L523 313 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 ENOSF1Q7L5Y1 443 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 MIB1Q86YT6 1006 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 ETFBKMTQ8IXQ9 262 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 SIX6OS1Q8N1H7 587 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 SCML4Q8N228 414 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 GAB3Q8WWW8 586 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 WBP2Q969T9 261 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 ULBP1Q9BZM6 244 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 INTS2Q9H0H0 1204 aaKnown RBP19.17■□□□□ 0.66
CLN6-210ENST00000635747 CNGB3Q9NQW8 809 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 DACH1Q9UI36 760 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 RASAL2Q9UJF2 1139 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 MMP17Q9ULZ9 603 aa19.17■□□□□ 0.66
CLN6-210ENST00000635747 TBC1D3BA6NDS4 549 aa19.16■□□□□ 0.66
CLN6-210ENST00000635747 MDM4O15151 490 aa19.16■□□□□ 0.66
CLN6-210ENST00000635747 AXIN1O15169 862 aa19.16■□□□□ 0.66
CLN6-210ENST00000635747 RPP40O75818 363 aaKnown RBP19.16■□□□□ 0.66
CLN6-210ENST00000635747 STC2O76061 302 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms