RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 LRRC14BA6NHZ5 514 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 RHPN2P1A8MT19 583 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 ISM1B1AKI9 464 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 ERVV-2B6SEH9 535 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 PRAMEF4O60810 478 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 MOSPD3O75425 235 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 ITGA10O75578 1167 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 GASTP01350 101 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 FGAP02671 866 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 MMP10P09238 476 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 FTH1P19P0C7X4 201 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 FGFR4P22455 802 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 HMGB2P26583 209 aaKnown RBP2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 ADSLP30566 484 aaPredicted RBP2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 PTGER1P34995 402 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 SREBF1P36956 1147 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 PIK3CBP42338 1070 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 TRAPPC10P48553 1259 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 PRIM2P49643 509 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 CASP5P51878 434 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 PRELPP51888 382 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 PER3P56645 1201 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 TMF1P82094 1093 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 TARDBPQ13148 414 aaKnown RBP eCLIP2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 STK3Q13188 491 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 RAPGEF1Q13905 1077 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 PLS1Q14651 629 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 CYP2A13Q16696 494 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 TMEM95Q3KNT9 176 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 DGKKQ5KSL6 1271 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 PRAMEF14Q5SWL7 426 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 HEATR3Q7Z4Q2 680 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 OR2C3Q8N628 320 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 VPS37AQ8NEZ2 397 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 OR7D4Q8NG98 312 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 IL31RAQ8NI17 732 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 IFI44Q8TCB0 444 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 ADAMTS15Q8TE58 950 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 ZNF480Q8WV37 535 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 PPM1EQ8WY54 764 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 EVI5LQ96CN4 794 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 PTCD3Q96EY7 689 aaKnown RBP2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 SLC35A4Q96G79 324 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 BOD1Q96IK1 185 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 ZC3H10Q96K80 434 aaKnown RBP2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 RIPOR3Q96MK2 946 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 NT5C1BQ96P26 610 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 HERPUD2Q9BSE4 406 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 ARMT1Q9H993 441 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 ZMAT3Q9HA38 289 aaKnown RBP2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 LMBRD1Q9NUN5 540 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 TRMT13Q9NUP7 481 aaKnown RBP2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 TBCCD1Q9NVR7 557 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 PNPOQ9NVS9 261 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 FLRT1Q9NZU1 646 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 PADI4Q9UM07 663 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 SCN4AP35499 1836 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 COL4A5P29400 1685 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 CEMIPQ8WUJ3 1361 aa2.97□□□□□ -1.93
SMARCB1-208ENST00000634926 A0A0C4DFX4 3053 aa2.96□□□□□ -1.93
SMARCB1-208ENST00000634926 LRRC37AA6NMS7 1700 aa2.96□□□□□ -1.93
SMARCB1-208ENST00000634926 SOS1Q07889 1333 aaPredicted RBP2.96□□□□□ -1.93
SMARCB1-208ENST00000634926 MYBBP1AQ9BQG0 1328 aaKnown RBP2.96□□□□□ -1.93
SMARCB1-208ENST00000634926 SLX4Q8IY92 1834 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 DLG5Q8TDM6 1919 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 A0A1W2PPL8 197 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 CCDC189A1A4V9 331 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 PRR23D1E9PI22 279 aaPredicted RBP2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 H3BUI4 141 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 MYO1FO00160 1098 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 POLRMTO00411 1230 aaKnown RBP2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 AMY1AP04745 511 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 PRR23D2P0DMB1 279 aaPredicted RBP2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 WT1P19544 449 aaPredicted RBP2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 MALP21145 153 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 TKTP29401 623 aaKnown RBP2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 GUCY1A2P33402 732 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 CRHR1P34998 444 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 MAPK10P53779 464 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 HSD11B2P80365 405 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 ATP8B2P98198 1209 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 TLE1Q04724 770 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 ZNF543Q08ER8 600 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 SNAPC2Q13487 334 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 TSTD2Q5T7W7 516 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 IZUMO3Q5VZ72 239 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 KIAA0895LQ68EN5 471 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 MED25Q71SY5 747 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 RSPH3Q86UC2 560 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 SKAP1Q86WV1 359 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 MYLK4Q86YV6 388 aaPredicted RBP2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 PQLC1Q8N2U9 271 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 LNX2Q8N448 690 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 REPS2Q8NFH8 660 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 CCHCR1Q8TD31 782 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 BRI3BPQ8WY22 251 aa2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 CDC5LQ99459 802 aaKnown RBP2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 VRK1Q99986 396 aaPredicted RBP2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 UNKQ9C0B0 810 aaKnown RBP2.96□□□□□ -1.94
SMARCB1-208ENST00000634926 WDR12Q9GZL7 423 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms