RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 MYL4P12829 197 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 DIO1P49895 249 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 ALDH5A1P51649 535 aaPredicted RBP3.94□□□□□ -1.78
SRP54-214ENST00000630962 COPB1P53618 953 aaKnown RBP3.94□□□□□ -1.78
SRP54-214ENST00000630962 HSF1Q00613 529 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 GHRHRQ02643 423 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 ZNF268Q14587 947 aaPredicted RBP3.94□□□□□ -1.78
SRP54-214ENST00000630962 KCNB1Q14721 858 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 TWIST1Q15672 202 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 CEP78Q5JTW2 689 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 MEX3CQ5U5Q3 659 aaKnown RBP3.94□□□□□ -1.78
SRP54-214ENST00000630962 ZNF626Q68DY1 528 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 CYB5RLQ6IPT4 315 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 ZNF425Q6IV72 752 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 ZNF66Q6ZN08 573 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 DCDC5Q6ZRR9 648 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 KCTD20Q7Z5Y7 419 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 MRPL10Q7Z7H8 261 aaKnown RBP3.94□□□□□ -1.78
SRP54-214ENST00000630962 DPP9Q86TI2 863 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 COL23A1Q86Y22 540 aaPredicted RBP3.94□□□□□ -1.78
SRP54-214ENST00000630962 FSTL5Q8N475 847 aaPredicted RBP3.94□□□□□ -1.78
SRP54-214ENST00000630962 ATP11CQ8NB49 1132 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 ZNF398Q8TD17 642 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 SH2D3AQ9BRG2 576 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 MAGEB5Q9BZ81 275 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 RXFP3Q9NSD7 469 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 RIMKLBQ9ULI2 386 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 HPSEQ9Y251 543 aa3.94□□□□□ -1.78
SRP54-214ENST00000630962 COL3A1P02461 1466 aaPredicted RBP3.93□□□□□ -1.78
SRP54-214ENST00000630962 SPRY2O43597 315 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 MOSPD3O75425 235 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 CD63P08962 238 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 HGFP14210 728 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 MMP8P22894 467 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 FPR3P25089 353 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 MPGP29372 298 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 SLC5A2P31639 672 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 COPAP53621 1224 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 ITGA8P53708 1063 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 PSG6Q00889 435 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 CCDC15Q0P6D6 951 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 DAZAP2Q15038 168 aaPredicted RBP3.93□□□□□ -1.78
SRP54-214ENST00000630962 SAFBQ15424 915 aaKnown RBP eCLIP3.93□□□□□ -1.78
SRP54-214ENST00000630962 CCDC181Q5TID7 509 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 MANEALQ5VSG8 457 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 C11orf87Q6NUJ2 197 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 TLDC1Q6P9B6 456 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 RANBP10Q6VN20 620 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 DPY19L3Q6ZPD9 716 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 UBE2Q1Q7Z7E8 422 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 LIX1LQ8IVB5 337 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 CCAR1Q8IX12 1150 aaKnown RBP3.93□□□□□ -1.78
SRP54-214ENST00000630962 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.93□□□□□ -1.78
SRP54-214ENST00000630962 SCARB1Q8WTV0 552 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 ZBTB45Q96K62 511 aaPredicted RBP3.93□□□□□ -1.78
SRP54-214ENST00000630962 MACROD1Q9BQ69 325 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 SARGQ9BW04 601 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 RNF26Q9BY78 433 aaPredicted RBP3.93□□□□□ -1.78
SRP54-214ENST00000630962 SLC25A32Q9H2D1 315 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 STARD7Q9NQZ5 370 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 ASIC5Q9NY37 505 aa3.93□□□□□ -1.78
SRP54-214ENST00000630962 SMIM35A0A1B0GVV1 85 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 TTC34A8MYJ7 566 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 BCAR3O75815 825 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 BMP15O95972 392 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 NHLRC4P0CG21 123 aaPredicted RBP3.92□□□□□ -1.78
SRP54-214ENST00000630962 APEHP13798 732 aaKnown RBP3.92□□□□□ -1.78
SRP54-214ENST00000630962 TACR3P29371 465 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 PFKFB3Q16875 520 aaPredicted RBP3.92□□□□□ -1.78
SRP54-214ENST00000630962 FAM110CQ1W6H9 321 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 HSP90AB2PQ58FF8 381 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 EPHA10Q5JZY3 1008 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 CC2D1BQ5T0F9 858 aaKnown RBP3.92□□□□□ -1.78
SRP54-214ENST00000630962 FAXCQ5TGI0 409 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 MRNIPQ6NTE8 343 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 DEF8Q6ZN54 512 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 USP49Q70CQ1 688 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 CNGA4Q8IV77 575 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 MAFAQ8NHW3 353 aaPredicted RBP3.92□□□□□ -1.78
SRP54-214ENST00000630962 OSR1Q8TAX0 266 aaPredicted RBP3.92□□□□□ -1.78
SRP54-214ENST00000630962 BCAS4Q8TDM0 211 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 OVCA2Q8WZ82 227 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 HMCESQ96FZ2 354 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 FCRL4Q96PJ5 515 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 SELENOOQ9BVL4 669 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 TBC1D23Q9NUY8 699 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 CHPF2Q9P2E5 772 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 RNF7Q9UBF6 113 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 VPS51Q9UID3 782 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 FZD4Q9ULV1 537 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 SCAF8Q9UPN6 1271 aaKnown RBP3.92□□□□□ -1.78
SRP54-214ENST00000630962 SLC27A6Q9Y2P4 619 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 PCDHGB6Q9Y5F9 930 aa3.92□□□□□ -1.78
SRP54-214ENST00000630962 E5RJQ4 531 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 CLIC1O00299 241 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 PPEF2O14830 753 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 KCNQ3O43525 872 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 CAND2O75155 1236 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 WDR47O94967 919 aa3.91□□□□□ -1.78
SRP54-214ENST00000630962 FGBP02675 491 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms