RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 ANKRD18AQ8IVF6 992 aa4.75□□□□□ -1.65
CDR1-202ENST00000625883 PRR25Q96S07 402 aa4.75□□□□□ -1.65
CDR1-202ENST00000625883 FAM167BQ9BTA0 163 aa4.75□□□□□ -1.65
CDR1-202ENST00000625883 RRN3Q9NYV6 651 aa4.75□□□□□ -1.65
CDR1-202ENST00000625883 C9orf78Q9NZ63 289 aaPredicted RBP4.75□□□□□ -1.65
CDR1-202ENST00000625883 EHD3Q9NZN3 535 aa4.75□□□□□ -1.65
CDR1-202ENST00000625883 STEAP1Q9UHE8 339 aa4.75□□□□□ -1.65
CDR1-202ENST00000625883 DAPP1Q9UN19 280 aa4.75□□□□□ -1.65
CDR1-202ENST00000625883 SH2B3Q9UQQ2 575 aa4.75□□□□□ -1.65
CDR1-202ENST00000625883 SPRY2O43597 315 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 PEX1O43933 1283 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 RPP40O75818 363 aaKnown RBP4.74□□□□□ -1.65
CDR1-202ENST00000625883 INSRRP14616 1297 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 ITPKBP27987 946 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 MCM5P33992 734 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 ADD2P35612 726 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 EIF4A1P60842 406 aaKnown RBP4.74□□□□□ -1.65
CDR1-202ENST00000625883 LSM12Q3MHD2 195 aaKnown RBP4.74□□□□□ -1.65
CDR1-202ENST00000625883 AASDHQ4L235 1098 aaPredicted RBP4.74□□□□□ -1.65
CDR1-202ENST00000625883 TMEM196Q5HYL7 178 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 IGFL4Q6B9Z1 124 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 Q6ZNX1 250 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 CCDC117Q8IWD4 279 aaPredicted RBP4.74□□□□□ -1.65
CDR1-202ENST00000625883 SPPL3Q8TCT6 385 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 XAGE5Q8WWM1 108 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 TFAP2BQ92481 460 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 MCRS1Q96EZ8 462 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 UBXN10Q96LJ8 280 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 SAYSD1Q9NPB0 183 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 SYBUQ9NX95 663 aa4.74□□□□□ -1.65
CDR1-202ENST00000625883 REXO2Q9Y3B8 237 aaKnown RBP4.74□□□□□ -1.65
CDR1-202ENST00000625883 MAST3O60307 1309 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 GXYLT2A0PJZ3 443 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 HMX3A6NHT5 357 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 A8MVJ9 347 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 EIF3FO00303 357 aaPredicted RBP4.73□□□□□ -1.65
CDR1-202ENST00000625883 KIAA0355O15063 1070 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 NCAM2O15394 837 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 PMPCBO75439 489 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 NXPH3O95157 252 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 CER1O95813 267 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 ONECUT2O95948 504 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 TMEM225BP0DP42 221 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 JUPP14923 745 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 CD19P15391 556 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 ZFXP17010 805 aaPredicted RBP4.73□□□□□ -1.65
CDR1-202ENST00000625883 CTGFP29279 349 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 GKP32189 559 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 MAPK9P45984 424 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 BLOC1S1P78537 153 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 POU5F1BQ06416 359 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 CUL4BQ13620 913 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 BMPR2Q13873 1038 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 CSHL1Q14406 222 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 PUM1Q14671 1186 aaKnown RBP eCLIP4.73□□□□□ -1.65
CDR1-202ENST00000625883 NBPF8Q3BBV2 869 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 TTC22Q5TAA0 569 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 ATPAF1Q5TC12 328 aaPredicted RBP4.73□□□□□ -1.65
CDR1-202ENST00000625883 FAM90A2PQ658T7 463 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 NFRKBQ6P4R8 1299 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 LVRNQ6Q4G3 990 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 Q6YL49 198 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 SLC44A3Q8N4M1 653 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 THAP4Q8WY91 577 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 LINC00476Q8WZB0 136 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 RUBCNQ92622 972 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 KRTAP4-11Q9BYQ6 195 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 VPS16Q9H269 839 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 MMRN2Q9H8L6 949 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 KIF17Q9P2E2 1029 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 NKX1-2Q9UD57 310 aaPredicted RBP4.73□□□□□ -1.65
CDR1-202ENST00000625883 FEM1BQ9UK73 627 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 CNTN6Q9UQ52 1028 aa4.73□□□□□ -1.65
CDR1-202ENST00000625883 KIF28PB7ZC32 967 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 H0Y3Z8 333 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 PSMD9O00233 223 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 CTIFO43310 598 aaKnown RBP4.72□□□□□ -1.65
CDR1-202ENST00000625883 PPP6R2O75170 966 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 TJP3O95049 919 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 NR2F6P10588 404 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 DRD1P21728 446 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 TGM1P22735 817 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 E2F1Q01094 437 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 DEUP1Q05D60 604 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 KCNJ12Q14500 433 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 PTPAQ15257 358 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 ST3GAL2Q16842 350 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 ALFQ53S48 1182 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 FBXO47Q5MNV8 452 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 RRAGAQ7L523 313 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 RAB11FIP2Q7L804 512 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 TRABD2AQ86V40 505 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 RAB11FIP4Q86YS3 637 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 HERC6Q8IVU3 1022 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 FTSJ3Q8IY81 847 aaKnown RBP4.72□□□□□ -1.65
CDR1-202ENST00000625883 CLASRPQ8N2M8 674 aaKnown RBP4.72□□□□□ -1.65
CDR1-202ENST00000625883 WDR60Q8WVS4 1066 aa4.72□□□□□ -1.65
CDR1-202ENST00000625883 ZSCAN31Q96LW9 406 aaPredicted RBP4.72□□□□□ -1.65
CDR1-202ENST00000625883 PAAF1Q9BRP4 392 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms