RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 TNFRSF10BO14763 440 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 AP1G2O75843 785 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 PAPSS2O95340 614 aaPredicted RBP13.34□□□□□ -0.27
PNKP-217ENST00000625216 HNRNPH3P31942 346 aaKnown RBP13.34□□□□□ -0.27
PNKP-217ENST00000625216 IFNAR2P48551 515 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 GRSF1Q12849 480 aaKnown RBP eCLIP13.34□□□□□ -0.27
PNKP-217ENST00000625216 RAPGEF1Q13905 1077 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 CCINQ13939 588 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 PON2Q15165 354 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 SNX30Q5VWJ9 437 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 SPOPLQ6IQ16 392 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 RAD9BQ6WBX8 426 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 ZSCAN30Q86W11 494 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 ZNF397Q8NF99 534 aaPredicted RBP13.34□□□□□ -0.27
PNKP-217ENST00000625216 TATDN2Q93075 761 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 ATP2A3Q93084 1043 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 KREMEN1Q96MU8 473 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 NT5C1BQ96P26 610 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 KCNK16Q96T55 309 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 CHP1Q99653 195 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 NT5C1AQ9BXI3 368 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 NIF3L1Q9GZT8 377 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 APOBEC3GQ9HC16 384 aaKnown RBP13.34□□□□□ -0.27
PNKP-217ENST00000625216 CSNK1G1Q9HCP0 422 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 TMEM30AQ9NV96 361 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 DAAM1Q9Y4D1 1078 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 DMDP11532 3685 aa13.34□□□□□ -0.27
PNKP-217ENST00000625216 FAM92AA1XBS5 289 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 F8VZ95 297 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 LILRB5O75023 590 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 OLFM2O95897 454 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 ABL1P00519 1130 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 OAS1P00973 400 aaKnown RBP13.33□□□□□ -0.28
PNKP-217ENST00000625216 ARSAP15289 507 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 DRD1P21728 446 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 DRAP1Q14919 205 aaPredicted RBP13.33□□□□□ -0.28
PNKP-217ENST00000625216 TMEM196Q5HYL7 178 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 WDR44Q5JSH3 913 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 HGSNATQ68CP4 663 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 TRIM68Q6AZZ1 485 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 DDX42Q86XP3 938 aaKnown RBP eCLIP13.33□□□□□ -0.28
PNKP-217ENST00000625216 C17orf53Q8N3J3 647 aaPredicted RBP13.33□□□□□ -0.28
PNKP-217ENST00000625216 RIN3Q8TB24 985 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 SLC2A14Q8TDB8 520 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 FBXO32Q969P5 355 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 SPAG5Q96R06 1193 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 HNRNPABQ99729 332 aaKnown RBP13.33□□□□□ -0.28
PNKP-217ENST00000625216 FBXO44Q9H4M3 255 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 ECT2Q9H8V3 914 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 MYO6Q9UM54 1294 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 COL4A3Q01955 1670 aa13.33□□□□□ -0.28
PNKP-217ENST00000625216 OTOL1A6NHN0 477 aaPredicted RBP13.32□□□□□ -0.28
PNKP-217ENST00000625216 LEFTY2O00292 366 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 SLC9A3R1O14745 358 aaPredicted RBP13.32□□□□□ -0.28
PNKP-217ENST00000625216 ARHGAP6O43182 974 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 ATG13O75143 517 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 CILPO75339 1184 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 NFATC1O95644 943 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 PLEKP08567 350 aaPredicted RBP13.32□□□□□ -0.28
PNKP-217ENST00000625216 FAM200BP0CF97 657 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 TDGF1P13385 188 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 HOXA6P31267 233 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 GJA4P35212 333 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 TUBP50607 506 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 SLC5A3P53794 718 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 GAS6Q14393 721 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 ASIC2Q16515 512 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 ARHGAP44Q17R89 818 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 EML3Q32P44 896 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 FBXO43Q4G163 708 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 HECTD3Q5T447 861 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 SFMBT2Q5VUG0 894 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 PPM1KQ8N3J5 372 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 C12orf29Q8N999 325 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 CCDC26Q8TAB7 109 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 KIAA1524Q8TCG1 905 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 SYN2Q92777 582 aaPredicted RBP13.32□□□□□ -0.28
PNKP-217ENST00000625216 CYFIP2Q96F07 1278 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 SMOQ99835 787 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 STK33Q9BYT3 514 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 RNF38Q9H0F5 515 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 PNPLA8Q9NP80 782 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 UBE2TQ9NPD8 197 aaPredicted RBP13.32□□□□□ -0.28
PNKP-217ENST00000625216 KRT82Q9NSB4 513 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 RBM12Q9NTZ6 932 aaKnown RBP13.32□□□□□ -0.28
PNKP-217ENST00000625216 ARHGAP20Q9P2F6 1191 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 CHORDC1Q9UHD1 332 aaPredicted RBP13.32□□□□□ -0.28
PNKP-217ENST00000625216 WNT6Q9Y6F9 365 aa13.32□□□□□ -0.28
PNKP-217ENST00000625216 NUP210Q8TEM1 1887 aaPredicted RBP13.31□□□□□ -0.28
PNKP-217ENST00000625216 FAM186AA6NE01 2351 aa13.31□□□□□ -0.28
PNKP-217ENST00000625216 COL4A2P08572 1712 aa13.31□□□□□ -0.28
PNKP-217ENST00000625216 NRDCO43847 1150 aa13.31□□□□□ -0.28
PNKP-217ENST00000625216 ZDHHC11BP0C7U3 371 aa13.31□□□□□ -0.28
PNKP-217ENST00000625216 CCDC130P13994 396 aa13.31□□□□□ -0.28
PNKP-217ENST00000625216 SOX5P35711 763 aa13.31□□□□□ -0.28
PNKP-217ENST00000625216 GALK1P51570 392 aa13.31□□□□□ -0.28
PNKP-217ENST00000625216 MAP3K7CLP57077 242 aa13.31□□□□□ -0.28
PNKP-217ENST00000625216 CDK17Q00537 523 aa13.31□□□□□ -0.28
PNKP-217ENST00000625216 SATB1Q01826 763 aa13.31□□□□□ -0.28
PNKP-217ENST00000625216 GCNT1Q02742 428 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms