RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 PHBP35232 272 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 GCKP35557 465 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 MLH1P40692 756 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 ZRSR2Q15696 482 aaKnown RBP18.37■□□□□ 0.53
PCF11-207ENST00000624931 TSNAXIP1Q2TAA8 658 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 P3H1Q32P28 736 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 TMEM270Q6UE05 265 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 ANKLE1Q8NAG6 615 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 RNF169Q8NCN4 708 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 SPDL1Q96EA4 605 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 ADAM2Q99965 735 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 CHST12Q9NRB3 414 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 PARVAQ9NVD7 372 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 DNAJC17Q9NVM6 304 aaKnown RBP18.37■□□□□ 0.53
PCF11-207ENST00000624931 PSMC3IPQ9P2W1 217 aaPredicted RBP18.37■□□□□ 0.53
PCF11-207ENST00000624931 CACNG4Q9UBN1 327 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 ITGA11Q9UKX5 1188 aa18.37■□□□□ 0.53
PCF11-207ENST00000624931 A8MUI8 341 aa18.36■□□□□ 0.53
PCF11-207ENST00000624931 PTGESO14684 152 aa18.36■□□□□ 0.53
PCF11-207ENST00000624931 ATF7P17544 494 aaPredicted RBP18.36■□□□□ 0.53
PCF11-207ENST00000624931 TBXAS1P24557 533 aaPredicted RBP18.36■□□□□ 0.53
PCF11-207ENST00000624931 SSTR3P32745 418 aaPredicted RBP18.36■□□□□ 0.53
PCF11-207ENST00000624931 MRPS35P82673 323 aaKnown RBP18.36■□□□□ 0.53
PCF11-207ENST00000624931 XKR4Q5GH76 650 aa18.36■□□□□ 0.53
PCF11-207ENST00000624931 FAM47EQ6ZV65 393 aa18.36■□□□□ 0.53
PCF11-207ENST00000624931 LRRC8DQ7L1W4 858 aa18.36■□□□□ 0.53
PCF11-207ENST00000624931 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.36■□□□□ 0.53
PCF11-207ENST00000624931 RBBP8NLQ8NC74 664 aaPredicted RBP18.36■□□□□ 0.53
PCF11-207ENST00000624931 C10orf82Q8WW14 230 aa18.36■□□□□ 0.53
PCF11-207ENST00000624931 LINC01599Q8WXQ3 324 aa18.36■□□□□ 0.53
PCF11-207ENST00000624931 UTP4Q969X6 686 aaKnown RBP18.36■□□□□ 0.53
PCF11-207ENST00000624931 HPDLQ96IR7 371 aa18.36■□□□□ 0.53
PCF11-207ENST00000624931 HERPUD2Q9BSE4 406 aa18.36■□□□□ 0.53
PCF11-207ENST00000624931 DERAQ9Y315 318 aa18.36■□□□□ 0.53
PCF11-207ENST00000624931 VPS41P49754 854 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 CDH8P55286 799 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 SATB1Q01826 763 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 WDR72Q3MJ13 1102 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 TRIM60Q495X7 471 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 ZNF667Q5HYK9 610 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 AGMOQ6ZNB7 445 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 NT5DC4Q86YG4 428 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 ALLCQ8N6M5 410 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 FEZF2Q8TBJ5 459 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 ARMC5Q96C12 935 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 GAD1Q99259 594 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 HEMGNQ9BXL5 484 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 DCLRE1BQ9H816 532 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 DDX56Q9NY93 547 aaKnown RBP18.35■□□□□ 0.53
PCF11-207ENST00000624931 ZFATQ9P243 1243 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 TRIM33Q9UPN9 1127 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 TM9SF1O15321 606 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 PEX11AO75192 247 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 TPBGLP0DKB5 382 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 KCNE1P15382 129 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 SELPP16109 830 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 ACADSP16219 412 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 ATP6V1C1P21283 382 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 GCAP28676 217 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 RBP5P82980 135 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 TAP1Q03518 808 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 DNAJC3Q13217 504 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 ORC1Q13415 861 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 MAMLD1Q13495 774 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 GPNMBQ14956 572 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 ZNF394Q53GI3 561 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 SLC39A5Q6ZMH5 540 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 LONP2Q86WA8 852 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 FAM13CQ8NE31 585 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 BEST2Q8NFU1 509 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 MICAL1Q8TDZ2 1067 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 CPA5Q8WXQ8 436 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 CYLDQ9NQC7 956 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 CISHQ9NSE2 258 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 MIOSQ9NXC5 875 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 PCDH10Q9P2E7 1040 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 HMGXB4Q9UGU5 601 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 ZNF148Q9UQR1 794 aa18.35■□□□□ 0.53
PCF11-207ENST00000624931 SCN5AQ14524 2016 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 TYROBPO43914 113 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 NBNO60934 754 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 CFHP08603 1231 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 CA4P22748 312 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 NOMO3P69849 1222 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 LBRQ14739 615 aaKnown RBP18.34■□□□□ 0.53
PCF11-207ENST00000624931 SEPT7Q16181 437 aaKnown RBP18.34■□□□□ 0.53
PCF11-207ENST00000624931 TCTN1Q2MV58 587 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 KLHL38Q2WGJ6 581 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 EFHC2Q5JST6 749 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 C9orf57Q5W0N0 161 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 RTN4RL1Q86UN2 441 aaPredicted RBP18.34■□□□□ 0.53
PCF11-207ENST00000624931 NKD2Q969F2 451 aaPredicted RBP18.34■□□□□ 0.53
PCF11-207ENST00000624931 NUDCD1Q96RS6 583 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 TBC1D10AQ9BXI6 508 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 BCO2Q9BYV7 579 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 PCDH9Q9HC56 1237 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 UBQLN1Q9UMX0 589 aaKnown RBP18.34■□□□□ 0.53
PCF11-207ENST00000624931 CNTN6Q9UQ52 1028 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 EFR3BQ9Y2G0 817 aa18.34■□□□□ 0.53
PCF11-207ENST00000624931 TANC1Q9C0D5 1861 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms