RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 FBXO47Q5MNV8 452 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 TREML2Q5T2D2 321 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 TMEM154Q6P9G4 183 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 CYP4X1Q8N118 509 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 THEM5Q8N1Q8 247 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 BBS5Q8N3I7 341 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 COLGALT1Q8NBJ5 622 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 ADAM32Q8TC27 787 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 ATP6V1E2Q96A05 226 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 OPTNQ96CV9 577 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 RRAGCQ9HB90 399 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 ADARB2Q9NS39 739 aaKnown RBP13.29□□□□□ -0.28
MSH6-215ENST00000622629 GOLGA8QA0A0J9YX86 632 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 GOLGA8OA6NCC3 632 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 GOLGA8NF8WBI6 632 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 H0YGN5 161 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 ALOX15BO15296 676 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 UNC5CO95185 931 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 KIF19Q2TAC6 998 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 ZC3H12AQ5D1E8 599 aaKnown RBP13.29□□□□□ -0.28
MSH6-215ENST00000622629 RIOX2Q8IUF8 465 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 TFAP2BQ92481 460 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 KLRG1Q96E93 195 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 GPBP1L1Q9HC44 474 aaPredicted RBP13.29□□□□□ -0.28
MSH6-215ENST00000622629 TIMM13Q9Y5L4 95 aaPredicted RBP13.29□□□□□ -0.28
MSH6-215ENST00000622629 ACTL7BQ9Y614 415 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 NFS1Q9Y697 457 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 MRPL42Q9Y6G3 142 aaKnown RBP13.29□□□□□ -0.28
MSH6-215ENST00000622629 CASQ2O14958 399 aaPredicted RBP13.28□□□□□ -0.28
MSH6-215ENST00000622629 USP12O75317 370 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 ADCYAP1R1P41586 468 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 PDK4Q16654 411 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 CELF3Q5SZQ8 465 aaKnown RBP13.28□□□□□ -0.28
MSH6-215ENST00000622629 ST13P4Q8IZP2 240 aaPredicted RBP13.28□□□□□ -0.28
MSH6-215ENST00000622629 CRYGNQ8WXF5 182 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 APOPT1Q96IL0 206 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 FIZ1Q96SL8 496 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 ZNF214Q9UL59 606 aaPredicted RBP13.28□□□□□ -0.28
MSH6-215ENST00000622629 CHD4Q14839 1912 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 MYH11P35749 1972 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 ATP8B3O60423 1300 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 NFKBIEO00221 500 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 LRCH4O75427 683 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 TAC1P20366 129 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 NCALDP61601 193 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 DCAF4L1Q3SXM0 396 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 CCDC88AQ3V6T2 1871 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 C16orf46Q6P387 395 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 SLC39A4Q6P5W5 647 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 MIPOL1Q8TD10 442 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 DCLRE1BQ9H816 532 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 ITGA11Q9UKX5 1188 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 SUFUQ9UMX1 484 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 AP1G2O75843 785 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 ABHD2P08910 425 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 TRIP10Q15642 601 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 FAM183BPQ6ZVS7 135 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 TTC8Q8TAM2 541 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 PTPRN2Q92932 1015 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 C15orf41Q9Y2V0 281 aa13.28□□□□□ -0.28
MSH6-215ENST00000622629 PMPCBO75439 489 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 CYP1A1P04798 512 aaPredicted RBP13.27□□□□□ -0.28
MSH6-215ENST00000622629 CD48P09326 243 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 GLRBP48167 497 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 SLC1A5Q15758 541 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 GRIK4Q16099 956 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 CYP1B1Q16678 543 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 HABP4Q5JVS0 413 aaKnown RBP13.27□□□□□ -0.28
MSH6-215ENST00000622629 KRT80Q6KB66 452 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 C4orf22Q6V702 233 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 FITM2Q8N6M3 262 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 C12orf50Q8NA57 414 aaPredicted RBP13.27□□□□□ -0.28
MSH6-215ENST00000622629 SLC2A14Q8TDB8 520 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 PDCD6IPQ8WUM4 868 aaKnown RBP13.27□□□□□ -0.28
MSH6-215ENST00000622629 NAF1Q96HR8 494 aaKnown RBP13.27□□□□□ -0.28
MSH6-215ENST00000622629 GPR88Q9GZN0 384 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 PDGFCQ9NRA1 345 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 TNFSF13BQ9Y275 285 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 STARD13Q9Y3M8 1113 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 WDR27A2RRH5 827 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 RRN3P2A6NIE6 340 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 CELF2O95319 508 aaKnown RBP13.27□□□□□ -0.28
MSH6-215ENST00000622629 LGALS2P05162 132 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 UBTFL6P0CB48 400 aaPredicted RBP13.27□□□□□ -0.28
MSH6-215ENST00000622629 CCDC130P13994 396 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 TCF4P15884 667 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 TCN1P20061 433 aaPredicted RBP13.27□□□□□ -0.28
MSH6-215ENST00000622629 CALB2P22676 271 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 ADIGQ0VDE8 80 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 GPC2Q8N158 579 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 PABPC5Q96DU9 382 aaKnown RBP13.27□□□□□ -0.28
MSH6-215ENST00000622629 RMDN2Q96LZ7 410 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 TBC1D10AQ9BXI6 508 aa13.27□□□□□ -0.28
MSH6-215ENST00000622629 KLHL2O95198 593 aa13.27□□□□□ -0.29
MSH6-215ENST00000622629 VNN1O95497 513 aa13.27□□□□□ -0.29
MSH6-215ENST00000622629 TRUB2O95900 331 aaKnown RBP13.27□□□□□ -0.29
MSH6-215ENST00000622629 FDFT1P37268 417 aa13.27□□□□□ -0.29
MSH6-215ENST00000622629 VHLP40337 213 aa13.27□□□□□ -0.29
MSH6-215ENST00000622629 ZNF143P52747 638 aaPredicted RBP13.27□□□□□ -0.29
MSH6-215ENST00000622629 MAP3K7CLP57077 242 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms