RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 NR3C2P08235 984 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 EIF4BP23588 611 aaKnown RBP13.53□□□□□ -0.24
CHD1L-210ENST00000622533 SERPINB6P35237 376 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 ETV4P43268 484 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 AQP5P55064 265 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 GRM1Q13255 1194 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 HADHQ16836 314 aaKnown RBP13.53□□□□□ -0.24
CHD1L-210ENST00000622533 SH3D19Q5HYK7 790 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 CIAPIN1Q6FI81 312 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 C1orf228Q6PIY5 440 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 THNSL1Q8IYQ7 743 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 UBR7Q8N806 425 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 NAT8LQ8N9F0 302 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 FBXO36Q8NEA4 188 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 ZFP28Q8NHY6 868 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 DEPTORQ8TB45 409 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 RSAD2Q8WXG1 361 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 GMLQ99445 158 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 SLC9A2Q9UBY0 812 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 DNAJB4Q9UDY4 337 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 HEMK1Q9Y5R4 338 aaPredicted RBP13.53□□□□□ -0.24
CHD1L-210ENST00000622533 CAPN8A6NHC0 703 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 F8VP50 259 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 K7ERI5 159 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 FKBP6O75344 327 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 ZNF189O75820 626 aaPredicted RBP13.53□□□□□ -0.24
CHD1L-210ENST00000622533 STAM2O75886 525 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 CLPTM1O96005 669 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 KCNA2P16389 499 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 POLR2BP30876 1174 aaKnown RBP13.53□□□□□ -0.24
CHD1L-210ENST00000622533 ZNF252P-AS1Q0IIN9 211 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 MPP3Q13368 585 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 HIC1Q14526 733 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 EMC2Q15006 297 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 ANKRD20A4Q4UJ75 823 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 EFHC1Q5JVL4 640 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 CDHR3Q6ZTQ4 885 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 PRPF31Q8WWY3 499 aaKnown RBP13.53□□□□□ -0.24
CHD1L-210ENST00000622533 SAE1Q9UBE0 346 aaPredicted RBP13.53□□□□□ -0.24
CHD1L-210ENST00000622533 PTPRJQ12913 1337 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 BOLA2-SMG1P6H3BVE0 249 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 SPAG6O75602 509 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 DHRS4L1P0CG22 281 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 CDH5P33151 784 aaPredicted RBP13.53□□□□□ -0.24
CHD1L-210ENST00000622533 EMP3P54852 163 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 CCNIQ14094 377 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 GK3PQ14409 553 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 TLR1Q15399 786 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 MYLK3Q32MK0 819 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 BBS9Q3SYG4 887 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 DNAL1Q4LDG9 190 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 SYCP2LQ5T4T6 812 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 GAB3Q8WWW8 586 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 CPT1BQ92523 772 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 EBF4Q9BQW3 602 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 QTRT2Q9H974 415 aaKnown RBP13.53□□□□□ -0.24
CHD1L-210ENST00000622533 CYP4F11Q9HBI6 524 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 ZNRF3Q9ULT6 936 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 PCDHGC3Q9UN70 934 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 IKBKGQ9Y6K9 419 aa13.53□□□□□ -0.24
CHD1L-210ENST00000622533 A0A0B4J269 797 aa13.52□□□□□ -0.24
CHD1L-210ENST00000622533 STIP1P31948 543 aaKnown RBP13.52□□□□□ -0.24
CHD1L-210ENST00000622533 COG7P83436 770 aa13.52□□□□□ -0.24
CHD1L-210ENST00000622533 TMPRSS15P98073 1019 aa13.52□□□□□ -0.24
CHD1L-210ENST00000622533 ZNF200P98182 395 aaPredicted RBP13.52□□□□□ -0.24
CHD1L-210ENST00000622533 FAAP100Q0VG06 881 aa13.52□□□□□ -0.24
CHD1L-210ENST00000622533 MTA1Q13330 715 aa13.52□□□□□ -0.24
CHD1L-210ENST00000622533 CYLC2Q14093 348 aaPredicted RBP13.52□□□□□ -0.24
CHD1L-210ENST00000622533 BBS12Q6ZW61 710 aa13.52□□□□□ -0.24
CHD1L-210ENST00000622533 NSUN6Q8TEA1 469 aaKnown RBP13.52□□□□□ -0.24
CHD1L-210ENST00000622533 UBAP1Q9NZ09 502 aa13.52□□□□□ -0.24
CHD1L-210ENST00000622533 APPL1Q9UKG1 709 aa13.52□□□□□ -0.24
CHD1L-210ENST00000622533 LZTS1Q9Y250 596 aa13.52□□□□□ -0.24
CHD1L-210ENST00000622533 CYB561D2O14569 222 aa13.52□□□□□ -0.25
CHD1L-210ENST00000622533 FAM155BO75949 473 aa13.52□□□□□ -0.25
CHD1L-210ENST00000622533 RAG1P15918 1043 aa13.52□□□□□ -0.25
CHD1L-210ENST00000622533 RPL5P46777 297 aaKnown RBP13.52□□□□□ -0.25
CHD1L-210ENST00000622533 BST1Q10588 318 aa13.52□□□□□ -0.25
CHD1L-210ENST00000622533 ITGA9Q13797 1035 aa13.52□□□□□ -0.25
CHD1L-210ENST00000622533 ABHD15Q6UXT9 468 aa13.52□□□□□ -0.25
CHD1L-210ENST00000622533 TRIM67Q6ZTA4 783 aa13.52□□□□□ -0.25
CHD1L-210ENST00000622533 TMC7Q7Z402 723 aa13.52□□□□□ -0.25
CHD1L-210ENST00000622533 ZNF554Q86TJ5 538 aa13.52□□□□□ -0.25
CHD1L-210ENST00000622533 CCDC106Q9BWC9 280 aa13.52□□□□□ -0.25
CHD1L-210ENST00000622533 PORCNQ9H237 461 aa13.52□□□□□ -0.25
CHD1L-210ENST00000622533 TMEM134Q9H6X4 195 aa13.52□□□□□ -0.25
CHD1L-210ENST00000622533 POLIQ9UNA4 740 aa13.52□□□□□ -0.25
CHD1L-210ENST00000622533 ZNF541Q9H0D2 1346 aa13.51□□□□□ -0.25
CHD1L-210ENST00000622533 CNTNAP2Q9UHC6 1331 aa13.51□□□□□ -0.25
CHD1L-210ENST00000622533 TCRBV7S3A2A0A539 114 aa13.51□□□□□ -0.25
CHD1L-210ENST00000622533 ASS1P00966 412 aaKnown RBP13.51□□□□□ -0.25
CHD1L-210ENST00000622533 PMLP29590 882 aa13.51□□□□□ -0.25
CHD1L-210ENST00000622533 CPOXP36551 454 aa13.51□□□□□ -0.25
CHD1L-210ENST00000622533 WNT7BP56706 349 aa13.51□□□□□ -0.25
CHD1L-210ENST00000622533 YWHAEP62258 255 aaKnown RBP13.51□□□□□ -0.25
CHD1L-210ENST00000622533 OTUD4Q01804 1114 aaKnown RBP13.51□□□□□ -0.25
CHD1L-210ENST00000622533 PTK7Q13308 1070 aa13.51□□□□□ -0.25
CHD1L-210ENST00000622533 ACAP1Q15027 740 aa13.51□□□□□ -0.25
CHD1L-210ENST00000622533 MTERF2Q49AM1 385 aa13.51□□□□□ -0.25
CHD1L-210ENST00000622533 TCHHL1Q5QJ38 904 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms