RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 MED10Q9BTT4 135 aa17.73■□□□□ 0.43
TARDBP-225ENST00000621715 KLF16Q9BXK1 252 aaPredicted RBP17.73■□□□□ 0.43
TARDBP-225ENST00000621715 VRTNQ9H8Y1 702 aa17.73■□□□□ 0.43
TARDBP-225ENST00000621715 DEC1Q9P2X7 70 aa17.73■□□□□ 0.43
TARDBP-225ENST00000621715 SH3BP1Q9Y3L3 701 aa17.73■□□□□ 0.43
TARDBP-225ENST00000621715 PLXNB3Q9ULL4 1909 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 AP1G2O75843 785 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 C4BPAP04003 597 aaKnown RBP17.72■□□□□ 0.43
TARDBP-225ENST00000621715 CAPNS1P04632 268 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 TUBP50607 506 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 DLG4P78352 724 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 ZNF33AQ06730 810 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 TRPC3Q13507 836 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 STK38Q15208 465 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 BMT2Q1RMZ1 405 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 SPDYCQ5MJ68 293 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 C12orf29Q8N999 325 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 OTUB2Q96DC9 234 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 DUSP9Q99956 384 aaKnown RBP17.72■□□□□ 0.43
TARDBP-225ENST00000621715 SLC39A2Q9NP94 309 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 DMAP1Q9NPF5 467 aaPredicted RBP17.72■□□□□ 0.43
TARDBP-225ENST00000621715 SLC6A14Q9UN76 642 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 CYP8B1Q9UNU6 501 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 STARD13Q9Y3M8 1113 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 NEUROG3Q9Y4Z2 214 aa17.72■□□□□ 0.43
TARDBP-225ENST00000621715 BPTFQ12830 3046 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.71■□□□□ 0.43
TARDBP-225ENST00000621715 UPK3BL1B0FP48 263 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 WASH3PC4AMC7 463 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 UPK3BL2E5RIL1 263 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 NEDD8-MDP1E9PL57 170 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 MDM4O15151 490 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 SPTLC2O15270 562 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 TLR5O60602 858 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 SERPINF2P08697 491 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 NTSR1P30989 418 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 ATICP31939 592 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 CLDN10P78369 228 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 CUL4BQ13620 913 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 DUOXA1Q1HG43 343 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 ZNF699Q32M78 642 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 UNC13DQ70J99 1090 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 C12orf56Q8IXR9 622 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 GRAMD1CQ8IYS0 662 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 CHCHD4Q8N4Q1 142 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 MINDY1Q8N5J2 469 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 SLC2A14Q8TDB8 520 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 IPO4Q8TEX9 1081 aaKnown RBP17.71■□□□□ 0.43
TARDBP-225ENST00000621715 SYAP1Q96A49 352 aaPredicted RBP17.71■□□□□ 0.43
TARDBP-225ENST00000621715 SMARCD1Q96GM5 515 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 HSPA12BQ96MM6 686 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 NMUR1Q9HB89 426 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 DNAJC17Q9NVM6 304 aaKnown RBP17.71■□□□□ 0.43
TARDBP-225ENST00000621715 NUDT5Q9UKK9 219 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 MSRB2Q9Y3D2 182 aa17.71■□□□□ 0.43
TARDBP-225ENST00000621715 UBE4BO95155 1302 aa17.71■□□□□ 0.42
TARDBP-225ENST00000621715 TMEM8BA6NDV4 472 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 HHLA1C9JL84 531 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 CYP26A1O43174 497 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 AP5Z1O43299 807 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 CACNG3O60359 315 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 GJB3O75712 270 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 CISD3P0C7P0 127 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 TYRP14679 529 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 MAP3K7CLP57077 242 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 RING1Q06587 406 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 NCOA4Q13772 614 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 BTBD8Q5XKL5 378 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 GRAMD4Q6IC98 578 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 SPOPLQ6IQ16 392 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 TPGS1Q6ZTW0 290 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 HTR3DQ70Z44 454 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 TRIML1Q8N9V2 468 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 KCNV2Q8TDN2 545 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 PARD3BQ8TEW8 1205 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 BHMTQ93088 406 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 TWNKQ96RR1 684 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 GABRG3Q99928 467 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 SLC32A1Q9H598 525 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 UPF2Q9HAU5 1272 aaKnown RBP17.7■□□□□ 0.42
TARDBP-225ENST00000621715 CSNK1G1Q9HCP0 422 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.7■□□□□ 0.421e-7■■■■□ 22.4
TARDBP-225ENST00000621715 FAM49BQ9NUQ9 324 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 CACNA2D2Q9NY47 1150 aa17.7■□□□□ 0.42
TARDBP-225ENST00000621715 ARHGAP33O14559 1287 aa17.69■□□□□ 0.42
TARDBP-225ENST00000621715 STX6O43752 255 aa17.69■□□□□ 0.42
TARDBP-225ENST00000621715 PHACTR2O75167 634 aa17.69■□□□□ 0.42
TARDBP-225ENST00000621715 PPP6R2O75170 966 aa17.69■□□□□ 0.42
TARDBP-225ENST00000621715 MAOBP27338 520 aa17.69■□□□□ 0.42
TARDBP-225ENST00000621715 HOXD12P35452 270 aa17.69■□□□□ 0.42
TARDBP-225ENST00000621715 NDST1P52848 882 aa17.69■□□□□ 0.42
TARDBP-225ENST00000621715 GFPT1Q06210 699 aaPredicted RBP17.69■□□□□ 0.42
TARDBP-225ENST00000621715 BIRC3Q13489 604 aa17.69■□□□□ 0.42
TARDBP-225ENST00000621715 KNOP1Q1ED39 458 aaKnown RBP17.69■□□□□ 0.42
TARDBP-225ENST00000621715 ZNF667Q5HYK9 610 aa17.69■□□□□ 0.42
TARDBP-225ENST00000621715 C1orf220Q5T0J3 134 aa17.69■□□□□ 0.42
TARDBP-225ENST00000621715 CHPFQ8IZ52 775 aa17.69■□□□□ 0.42
TARDBP-225ENST00000621715 MRGPRX1Q96LB2 322 aa17.69■□□□□ 0.42
TARDBP-225ENST00000621715 BBS2Q9BXC9 721 aa17.69■□□□□ 0.42
TARDBP-225ENST00000621715 CUEDC2Q9H467 287 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms