RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 GOLGA6DP0CG33 693 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 SELPP16109 830 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 CAPN2P17655 700 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 MAP2K2P36507 400 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 BCAT1P54687 386 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 YWHAZP63104 245 aaKnown RBP10.98□□□□□ -0.65
VPS11-208ENST00000621676 IRX4P78413 519 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 C11orf63Q6NUN7 778 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 ZNF662Q6ZS27 426 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 IFNLR1Q8IU57 520 aaPredicted RBP10.98□□□□□ -0.65
VPS11-208ENST00000621676 DCLK3Q9C098 648 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 CRISPLD1Q9H336 500 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 RAB6BQ9NRW1 208 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 GOLGA6AQ9NYA3 693 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 ADAM21Q9UKJ8 722 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 AP4E1Q9UPM8 1137 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 MGAMO43451 1857 aa10.98□□□□□ -0.65
VPS11-208ENST00000621676 GRXCR1A8MXD5 290 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 AGPSO00116 658 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 DFFAO00273 331 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 PRLRP16471 622 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 EPHB2P29323 1055 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 POU5F1BQ06416 359 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 GPS2Q13227 327 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 NNTQ13423 1086 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 TFDP3Q5H9I0 405 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 IL31Q6EBC2 164 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.97□□□□□ -0.65
VPS11-208ENST00000621676 UBR7Q8N806 425 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 RSPH1Q8WYR4 309 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 CYP2S1Q96SQ9 504 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 UNKQ9C0B0 810 aaKnown RBP10.97□□□□□ -0.65
VPS11-208ENST00000621676 CYP3A43Q9HB55 503 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 PRDM4Q9UKN5 801 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 LOXHD1Q8IVV2 1947 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 WDR91A4D1P6 747 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 C2CD4BA6NLJ0 364 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 PAEPP09466 180 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 SSTR1P30872 391 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 GMPRP36959 345 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 ETFBP38117 255 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 SLC11A1P49279 550 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 CXCR3P49682 368 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 EPHB4P54760 987 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 SESN2P58004 480 aaPredicted RBP10.97□□□□□ -0.65
VPS11-208ENST00000621676 IFI35P80217 286 aaPredicted RBP10.97□□□□□ -0.65
VPS11-208ENST00000621676 TUSC3Q13454 348 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 PIGHQ14442 188 aaPredicted RBP10.97□□□□□ -0.65
VPS11-208ENST00000621676 GPNMBQ14956 572 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 OLFML1Q6UWY5 402 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 CTAGE3PQ8IX95 158 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 SLAIN1Q8ND83 568 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 TRIM11Q96F44 468 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 NAP1L3Q99457 506 aaPredicted RBP10.97□□□□□ -0.65
VPS11-208ENST00000621676 TRPC7Q9HCX4 862 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 RAB21Q9UL25 225 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 STRIP2Q9ULQ0 834 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 LOC285556D6RIA3 1793 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 LOC102724159A0A0B4J2E5 919 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 TJP3O95049 919 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 GAS8O95995 478 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 MYOGP15173 224 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 TPH1P17752 444 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 SEC24CP53992 1094 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 VCPP55072 806 aaKnown RBP10.97□□□□□ -0.65
VPS11-208ENST00000621676 TSPY1Q01534 308 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 ITKQ08881 620 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 PWP2Q15269 919 aaKnown RBP10.97□□□□□ -0.65
VPS11-208ENST00000621676 CFAP36Q96G28 342 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 TKTL2Q9H0I9 626 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 SLC17A6Q9P2U8 582 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 GGT7Q9UJ14 662 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 RASAL2Q9UJF2 1139 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 CHMP2BQ9UQN3 213 aa10.97□□□□□ -0.65
VPS11-208ENST00000621676 PMM2O15305 246 aa10.96□□□□□ -0.65
VPS11-208ENST00000621676 TSPAN3O60637 253 aa10.96□□□□□ -0.65
VPS11-208ENST00000621676 TRUB2O95900 331 aaKnown RBP10.96□□□□□ -0.65
VPS11-208ENST00000621676 CDC42EP1Q00587 391 aa10.96□□□□□ -0.65
VPS11-208ENST00000621676 PTK7Q13308 1070 aa10.96□□□□□ -0.65
VPS11-208ENST00000621676 TUBB2AQ13885 445 aa10.96□□□□□ -0.65
VPS11-208ENST00000621676 VARS2Q5ST30 1063 aaKnown RBP10.96□□□□□ -0.65
VPS11-208ENST00000621676 NAT14Q8WUY8 206 aa10.96□□□□□ -0.65
VPS11-208ENST00000621676 RPGRIP1Q96KN7 1286 aa10.96□□□□□ -0.65
VPS11-208ENST00000621676 YME1L1Q96TA2 773 aa10.96□□□□□ -0.65
VPS11-208ENST00000621676 TUBB2BQ9BVA1 445 aa10.96□□□□□ -0.65
VPS11-208ENST00000621676 GKN1Q9NS71 199 aa10.96□□□□□ -0.65
VPS11-208ENST00000621676 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.96□□□□□ -0.65
VPS11-208ENST00000621676 ACTL7AQ9Y615 435 aa10.96□□□□□ -0.65
VPS11-208ENST00000621676 A0A0U1RQS6 177 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 GOLGA6L10A6NI86 522 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 E7EVH7 732 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 CAND2O75155 1236 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 SPAG7O75391 227 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 SYF2O95926 243 aaKnown RBP10.96□□□□□ -0.66
VPS11-208ENST00000621676 MYBL1P10243 752 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 ODC1P11926 461 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 AXLP30530 894 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 ACTN2P35609 894 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 CDKN2BP42772 138 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 FAAP100Q0VG06 881 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms