RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 FBXO21O94952 628 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 MBL2P11226 248 aaPredicted RBP15.01□□□□□ -0.01
CBWD3-217ENST00000621474 CASP14P31944 242 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 PRKCIP41743 596 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 PLCB2Q00722 1185 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 C2CD6Q53TS8 623 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 HGSNATQ68CP4 663 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 SPECC1LQ69YQ0 1117 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 OLFML1Q6UWY5 402 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 TMEM35BQ8NCS4 154 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 SH3RF2Q8TEC5 729 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 CPLX3Q8WVH0 158 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 CPA5Q8WXQ8 436 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 IRGQQ8WZA9 623 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 EDEM1Q92611 657 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 WBP2Q969T9 261 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 ZFYVE19Q96K21 471 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 EPHX3Q9H6B9 360 aa15.01□□□□□ -0.01
CBWD3-217ENST00000621474 ATP5C1P36542 298 aaKnown RBP15□□□□□ -0.01
CBWD3-217ENST00000621474 GABRB2P47870 512 aa15□□□□□ -0.01
CBWD3-217ENST00000621474 ZBED6P86452 979 aa15□□□□□ -0.01
CBWD3-217ENST00000621474 TAF5Q15542 800 aa15□□□□□ -0.01
CBWD3-217ENST00000621474 SFMBT2Q5VUG0 894 aa15□□□□□ -0.01
CBWD3-217ENST00000621474 NAA35Q5VZE5 725 aa15□□□□□ -0.01
CBWD3-217ENST00000621474 FAM183BPQ6ZVS7 135 aa15□□□□□ -0.01
CBWD3-217ENST00000621474 UBALD2Q8IYN6 164 aa15□□□□□ -0.01
CBWD3-217ENST00000621474 ARHGAP18Q8N392 663 aa15□□□□□ -0.01
CBWD3-217ENST00000621474 EDAQ92838 391 aa15□□□□□ -0.01
CBWD3-217ENST00000621474 IQCDQ96DY2 449 aa15□□□□□ -0.01
CBWD3-217ENST00000621474 AGPAT1Q99943 283 aa15□□□□□ -0.01
CBWD3-217ENST00000621474 FAM83CQ9BQN1 747 aa15□□□□□ -0.01
CBWD3-217ENST00000621474 TRMT61BQ9BVS5 477 aaKnown RBP15□□□□□ -0.01
CBWD3-217ENST00000621474 KLF16Q9BXK1 252 aaPredicted RBP15□□□□□ -0.01
CBWD3-217ENST00000621474 HAUS4Q9H6D7 363 aa15□□□□□ -0.01
CBWD3-217ENST00000621474 GKN1Q9NS71 199 aa15□□□□□ -0.01
CBWD3-217ENST00000621474 CEP83Q9Y592 693 aa15□□□□□ -0.01
CBWD3-217ENST00000621474 DPYSL4O14531 572 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 CHADO15335 359 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 LTFP02788 710 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 RALAP11233 206 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 GDI1P31150 447 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 CENPCQ03188 943 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 MTF1Q14872 753 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 ASIC2Q16515 512 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 C10orf120Q5SQS8 335 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 ZNF571Q7Z3V5 609 aaPredicted RBP14.99□□□□□ -0.01
CBWD3-217ENST00000621474 TRIM5Q9C035 493 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 PDCL3Q9H2J4 239 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 C11orf16Q9NQ32 467 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 ABCC13Q9NSE7 274 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 OTOL1A6NHN0 477 aaPredicted RBP14.99□□□□□ -0.01
CBWD3-217ENST00000621474 SHISA7A6NL88 538 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 DLL1O00548 723 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 SKILP12757 684 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 ALADP13716 330 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 MMP8P22894 467 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 TNK2Q07912 1038 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 SIGLEC14Q08ET2 396 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 PTP4A2Q12974 167 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 ARID5BQ14865 1188 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 CLEC16AQ2KHT3 1053 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 BTBD8Q5XKL5 378 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 TRIM68Q6AZZ1 485 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 XYLT1Q86Y38 959 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 FMNL3Q8IVF7 1028 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 SLC30A5Q8TAD4 765 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 SYN2Q92777 582 aaPredicted RBP14.99□□□□□ -0.01
CBWD3-217ENST00000621474 NOX5Q96PH1 765 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 DNMT3LQ9UJW3 386 aa14.99□□□□□ -0.01
CBWD3-217ENST00000621474 LUC7L2Q9Y383 392 aaKnown RBP14.99□□□□□ -0.01
CBWD3-217ENST00000621474 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.99□□□□□ -0.01
CBWD3-217ENST00000621474 USP34Q70CQ2 3546 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 KRBA1A5PL33 1030 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 SCAMP3O14828 347 aaKnown RBP14.98□□□□□ -0.01
CBWD3-217ENST00000621474 PLEKP08567 350 aaPredicted RBP14.98□□□□□ -0.01
CBWD3-217ENST00000621474 CCDC172P0C7W6 258 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 HNRNPH3P31942 346 aaKnown RBP14.98□□□□□ -0.01
CBWD3-217ENST00000621474 ZNF75DP51815 510 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 GOLGA8FQ08AF8 430 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 GOLGA8DPQ0D2H9 430 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 EFEMP1Q12805 493 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 TBX2Q13207 712 aaPredicted RBP14.98□□□□□ -0.01
CBWD3-217ENST00000621474 SYPL2Q5VXT5 272 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 MSANTD2Q6P1R3 559 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 WDR59Q6PJI9 974 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 TRIM72Q6ZMU5 477 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 ERICH1Q86X53 443 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 MIB1Q86YT6 1006 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 TTC16Q8NEE8 873 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 CHFRQ96EP1 664 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 CDK5RAP1Q96SZ6 601 aaKnown RBP14.98□□□□□ -0.01
CBWD3-217ENST00000621474 ANP32EQ9BTT0 268 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 NACA2Q9H009 215 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 BRD9Q9H8M2 597 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 TRPV5Q9NQA5 729 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 HPS4Q9NQG7 708 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 TAS2R14Q9NYV8 317 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 GTSE1Q9NYZ3 720 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 CFAP97Q9P2B7 532 aa14.98□□□□□ -0.01
CBWD3-217ENST00000621474 SFMBT1Q9UHJ3 866 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms