RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 HEBP1Q9NRV9 189 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 GKN1Q9NS71 199 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 CFAP97Q9P2B7 532 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 DNMT3LQ9UJW3 386 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 NOCTQ9UK39 431 aaKnown RBP19.18■□□□□ 0.66
LITAF-220ENST00000620789 NUDT5Q9UKK9 219 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 CEP83Q9Y592 693 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 E5RJQ4 531 aa19.17■□□□□ 0.66
LITAF-220ENST00000620789 PRKCQQ04759 706 aa19.17■□□□□ 0.66
LITAF-220ENST00000620789 PDGFRLQ15198 375 aa19.17■□□□□ 0.66
LITAF-220ENST00000620789 TAF3Q5VWG9 929 aa19.17■□□□□ 0.66
LITAF-220ENST00000620789 BSPRYQ5W0U4 402 aa19.17■□□□□ 0.66
LITAF-220ENST00000620789 BTBD8Q5XKL5 378 aa19.17■□□□□ 0.66
LITAF-220ENST00000620789 ZNF677Q86XU0 584 aa19.17■□□□□ 0.66
LITAF-220ENST00000620789 SCUBE3Q8IX30 993 aa19.17■□□□□ 0.66
LITAF-220ENST00000620789 C1orf131Q8NDD1 294 aaKnown RBP19.17■□□□□ 0.66
LITAF-220ENST00000620789 CLEC4CQ8WTT0 213 aa19.17■□□□□ 0.66
LITAF-220ENST00000620789 SHDQ96IW2 340 aa19.17■□□□□ 0.66
LITAF-220ENST00000620789 LRFN3Q9BTN0 628 aa19.17■□□□□ 0.66
LITAF-220ENST00000620789 KLF16Q9BXK1 252 aaPredicted RBP19.17■□□□□ 0.66
LITAF-220ENST00000620789 MFSD1Q9H3U5 465 aa19.17■□□□□ 0.66
LITAF-220ENST00000620789 ABCC13Q9NSE7 274 aa19.17■□□□□ 0.66
LITAF-220ENST00000620789 IFNKQ9P0W0 207 aa19.17■□□□□ 0.66
LITAF-220ENST00000620789 MDM4O15151 490 aa19.16■□□□□ 0.66
LITAF-220ENST00000620789 SART1O43290 800 aaKnown RBP19.16■□□□□ 0.66
LITAF-220ENST00000620789 CDH5P33151 784 aaPredicted RBP19.16■□□□□ 0.66
LITAF-220ENST00000620789 PBX1P40424 430 aa19.16■□□□□ 0.66
LITAF-220ENST00000620789 IFNAR2P48551 515 aa19.16■□□□□ 0.66
LITAF-220ENST00000620789 STARD6P59095 220 aa19.16■□□□□ 0.66
LITAF-220ENST00000620789 TNK2Q07912 1038 aa19.16■□□□□ 0.66
LITAF-220ENST00000620789 TRIM68Q6AZZ1 485 aa19.16■□□□□ 0.66
LITAF-220ENST00000620789 RSRC2Q7L4I2 434 aaKnown RBP19.16■□□□□ 0.66
LITAF-220ENST00000620789 TMEM35BQ8NCS4 154 aa19.16■□□□□ 0.66
LITAF-220ENST00000620789 BAP1Q92560 729 aa19.16■□□□□ 0.66
LITAF-220ENST00000620789 PPP1R13BQ96KQ4 1090 aa19.16■□□□□ 0.66
LITAF-220ENST00000620789 CPXM1Q96SM3 734 aa19.16■□□□□ 0.66
LITAF-220ENST00000620789 HPS4Q9NQG7 708 aa19.16■□□□□ 0.66
LITAF-220ENST00000620789 OLA1Q9NTK5 396 aaKnown RBP19.16■□□□□ 0.66
LITAF-220ENST00000620789 DUS2Q9NX74 493 aaKnown RBP19.16■□□□□ 0.66
LITAF-220ENST00000620789 GTSE1Q9NYZ3 720 aa19.16■□□□□ 0.66
LITAF-220ENST00000620789 MYO6Q9UM54 1294 aa19.16■□□□□ 0.66
LITAF-220ENST00000620789 WNT6Q9Y6F9 365 aa19.16■□□□□ 0.66
LITAF-220ENST00000620789 COL4A3Q01955 1670 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 E2F8A0AVK6 867 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 PAPSS1O43252 624 aaPredicted RBP19.15■□□□□ 0.66
LITAF-220ENST00000620789 LSM8O95777 96 aaKnown RBP19.15■□□□□ 0.66
LITAF-220ENST00000620789 LTFP02788 710 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 MMEP08473 750 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 IRF1P10914 325 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 GLULP15104 373 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 MLLT6P55198 1093 aaPredicted RBP19.15■□□□□ 0.66
LITAF-220ENST00000620789 CDR2Q01850 454 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 GOLGA8FQ08AF8 430 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 GOLGA8DPQ0D2H9 430 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 EFEMP1Q12805 493 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 RUNX3Q13761 415 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 ITPRIPL2Q3MIP1 535 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 FIGNQ5HY92 759 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 TPRG1Q6ZUI0 275 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 MIB1Q86YT6 1006 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 FBXL6Q8N531 539 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 SLC20A1Q8WUM9 679 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 EDEM1Q92611 657 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 GOLGA1Q92805 767 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 DDX23Q9BUQ8 820 aaKnown RBP19.15■□□□□ 0.66
LITAF-220ENST00000620789 TTYH3Q9C0H2 523 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 EBF3Q9H4W6 596 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 TBC1D17Q9HA65 648 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 TJP2Q9UDY2 1190 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 RASAL2Q9UJF2 1139 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 SH3BP1Q9Y3L3 701 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 PIAS3Q9Y6X2 628 aa19.15■□□□□ 0.66
LITAF-220ENST00000620789 SLC9A3R1O14745 358 aaPredicted RBP19.14■□□□□ 0.65
LITAF-220ENST00000620789 TPM3P06753 285 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 ARSAP15289 507 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 KPNA1P52294 538 aaPredicted RBP19.14■□□□□ 0.65
LITAF-220ENST00000620789 SNX16P57768 344 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 ARID5AQ03989 594 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 EML3Q32P44 896 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 PTPN20Q4JDL3 420 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 CWF19L1Q69YN2 538 aaKnown RBP19.14■□□□□ 0.65
LITAF-220ENST00000620789 FMNL3Q8IVF7 1028 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 FLCNQ8NFG4 579 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 TTC8Q8TAM2 541 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 IPO4Q8TEX9 1081 aaKnown RBP19.14■□□□□ 0.65
LITAF-220ENST00000620789 RNF139Q8WU17 664 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 ATP2A3Q93084 1043 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 MSANTD3Q96H12 275 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 EDEM3Q9BZQ6 932 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 XPO4Q9C0E2 1151 aaKnown RBP19.14■□□□□ 0.65
LITAF-220ENST00000620789 LINC00597Q9H2U6 94 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 C8orf33Q9H7E9 229 aaPredicted RBP19.14■□□□□ 0.65
LITAF-220ENST00000620789 MARCH2Q9P0N8 246 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 STRIP2Q9ULQ0 834 aa19.14■□□□□ 0.65
LITAF-220ENST00000620789 SHISA7A6NL88 538 aa19.13■□□□□ 0.65
LITAF-220ENST00000620789 LRRC53A6NM62 1247 aa19.13■□□□□ 0.65
LITAF-220ENST00000620789 SCAMP3O14828 347 aaKnown RBP19.13■□□□□ 0.65
LITAF-220ENST00000620789 CCDC172P0C7W6 258 aa19.13■□□□□ 0.65
LITAF-220ENST00000620789 FERP16591 822 aa19.13■□□□□ 0.65
LITAF-220ENST00000620789 CHRNB2P17787 502 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms