RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 ECT2Q9H8V3 914 aa26.62■■□□□ 1.85
SURF1-205ENST00000615505 PLCB1Q9NQ66 1216 aa26.62■■□□□ 1.85
SURF1-205ENST00000615505 TBC1D14Q9P2M4 693 aa26.62■■□□□ 1.85
SURF1-205ENST00000615505 AJAP1Q9UKB5 411 aaPredicted RBP26.62■■□□□ 1.85
SURF1-205ENST00000615505 COL4A3Q01955 1670 aa26.62■■□□□ 1.85
SURF1-205ENST00000615505 NFATC1O95644 943 aa26.61■■□□□ 1.85
SURF1-205ENST00000615505 LCP1P13796 627 aa26.61■■□□□ 1.85
SURF1-205ENST00000615505 UCHL3P15374 230 aa26.61■■□□□ 1.85
SURF1-205ENST00000615505 GPD2P43304 727 aa26.61■■□□□ 1.85
SURF1-205ENST00000615505 MAGEA9P43362 315 aa26.61■■□□□ 1.85
SURF1-205ENST00000615505 BPIFB4P59827 614 aa26.61■■□□□ 1.85
SURF1-205ENST00000615505 DRAP1Q14919 205 aaPredicted RBP26.61■■□□□ 1.85
SURF1-205ENST00000615505 FUCA2Q9BTY2 467 aa26.61■■□□□ 1.85
SURF1-205ENST00000615505 HSD3B7Q9H2F3 369 aa26.61■■□□□ 1.85
SURF1-205ENST00000615505 ACP6Q9NPH0 428 aa26.61■■□□□ 1.85
SURF1-205ENST00000615505 DLGAP2Q9P1A6 1054 aa26.61■■□□□ 1.85
SURF1-205ENST00000615505 NUDT5Q9UKK9 219 aa26.61■■□□□ 1.85
SURF1-205ENST00000615505 FHOD1Q9Y613 1164 aa26.61■■□□□ 1.85
SURF1-205ENST00000615505 OTOL1A6NHN0 477 aaPredicted RBP26.6■■□□□ 1.85
SURF1-205ENST00000615505 LGALS16A8MUM7 142 aa26.6■■□□□ 1.85
SURF1-205ENST00000615505 BTBD8Q5XKL5 378 aa26.6■■□□□ 1.85
SURF1-205ENST00000615505 RSRC2Q7L4I2 434 aaKnown RBP26.6■■□□□ 1.85
SURF1-205ENST00000615505 DHX40Q8IX18 779 aaKnown RBP26.6■■□□□ 1.85
SURF1-205ENST00000615505 FAM71AQ8IYT1 594 aa26.6■■□□□ 1.85
SURF1-205ENST00000615505 CLDN23Q96B33 292 aa26.6■■□□□ 1.85
SURF1-205ENST00000615505 KLF16Q9BXK1 252 aaPredicted RBP26.6■■□□□ 1.85
SURF1-205ENST00000615505 IRF1P10914 325 aa26.59■■□□□ 1.85
SURF1-205ENST00000615505 RPS9P46781 194 aaKnown RBP26.59■■□□□ 1.85
SURF1-205ENST00000615505 UBXN1Q04323 297 aa26.59■■□□□ 1.85
SURF1-205ENST00000615505 DENND1BQ6P3S1 775 aa26.59■■□□□ 1.85
SURF1-205ENST00000615505 TXNDC11Q6PKC3 985 aa26.59■■□□□ 1.85
SURF1-205ENST00000615505 ADGRG2Q8IZP9 1017 aa26.59■■□□□ 1.85
SURF1-205ENST00000615505 STK32AQ8WU08 396 aa26.59■■□□□ 1.85
SURF1-205ENST00000615505 IRGQQ8WZA9 623 aa26.59■■□□□ 1.85
SURF1-205ENST00000615505 NDRG1Q92597 394 aaKnown RBP26.59■■□□□ 1.85
SURF1-205ENST00000615505 EXOC4Q96A65 974 aa26.59■■□□□ 1.85
SURF1-205ENST00000615505 OTUB2Q96DC9 234 aa26.59■■□□□ 1.85
SURF1-205ENST00000615505 NAA15Q9BXJ9 866 aaKnown RBP26.59■■□□□ 1.85
SURF1-205ENST00000615505 STK33Q9BYT3 514 aa26.59■■□□□ 1.85
SURF1-205ENST00000615505 ST7Q9NRC1 585 aa26.59■■□□□ 1.85
SURF1-205ENST00000615505 LSM7Q9UK45 103 aaKnown RBP26.59■■□□□ 1.85
SURF1-205ENST00000615505 DAAM1Q9Y4D1 1078 aa26.59■■□□□ 1.85
SURF1-205ENST00000615505 FBXO21O94952 628 aa26.58■■□□□ 1.85
SURF1-205ENST00000615505 CLCN1P35523 988 aa26.58■■□□□ 1.85
SURF1-205ENST00000615505 ACADSBP45954 432 aa26.58■■□□□ 1.85
SURF1-205ENST00000615505 PTPN5P54829 565 aa26.58■■□□□ 1.85
SURF1-205ENST00000615505 DAOAP59103 153 aa26.58■■□□□ 1.85
SURF1-205ENST00000615505 PON2Q15165 354 aa26.58■■□□□ 1.85
SURF1-205ENST00000615505 ZNF687Q8N1G0 1237 aa26.58■■□□□ 1.85
SURF1-205ENST00000615505 PRSS33Q8NF86 280 aa26.58■■□□□ 1.85
SURF1-205ENST00000615505 PCMTD1Q96MG8 357 aaPredicted RBP26.58■■□□□ 1.85
SURF1-205ENST00000615505 IRF2BPLQ9H1B7 796 aa26.58■■□□□ 1.85
SURF1-205ENST00000615505 LMAN1LQ9HAT1 526 aa26.58■■□□□ 1.85
SURF1-205ENST00000615505 OLA1Q9NTK5 396 aaKnown RBP26.58■■□□□ 1.85
SURF1-205ENST00000615505 STRIP2Q9ULQ0 834 aa26.58■■□□□ 1.85
SURF1-205ENST00000615505 PIK3R2O00459 728 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 SCAMP3O14828 347 aaKnown RBP26.57■■□□□ 1.84
SURF1-205ENST00000615505 MDM4O15151 490 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 ATP1A3P13637 1013 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 GJA4P35212 333 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 KRT9P35527 623 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 RPL34P49207 117 aaKnown RBP26.57■■□□□ 1.84
SURF1-205ENST00000615505 COG7P83436 770 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 EFEMP1Q12805 493 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 FZD5Q13467 585 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 LRRC32Q14392 662 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 BSPRYQ5W0U4 402 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 HTR3DQ70Z44 454 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 BHLHA9Q7RTU4 235 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 MIB1Q86YT6 1006 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 RNF139Q8WU17 664 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 GOLGA1Q92805 767 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 ABCC13Q9NSE7 274 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 FAM207AQ9NSI2 230 aaPredicted RBP26.57■■□□□ 1.84
SURF1-205ENST00000615505 RASAL2Q9UJF2 1139 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 PCDHGC3Q9UN70 934 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 MIA3Q5JRA6 1907 aa26.57■■□□□ 1.84
SURF1-205ENST00000615505 YJEFN3A6XGL0 299 aa26.56■■□□□ 1.84
SURF1-205ENST00000615505 E7ENQ6 273 aa26.56■■□□□ 1.84
SURF1-205ENST00000615505 GABBR2O75899 941 aa26.56■■□□□ 1.84
SURF1-205ENST00000615505 PNMA6AP0CW24 399 aaPredicted RBP26.56■■□□□ 1.84
SURF1-205ENST00000615505 SYCP1Q15431 976 aa26.56■■□□□ 1.84
SURF1-205ENST00000615505 DGKKQ5KSL6 1271 aa26.56■■□□□ 1.84
SURF1-205ENST00000615505 APTXQ7Z2E3 356 aaKnown RBP26.56■■□□□ 1.84
SURF1-205ENST00000615505 SLC47A2Q86VL8 602 aa26.56■■□□□ 1.84
SURF1-205ENST00000615505 MIS12Q9H081 205 aa26.56■■□□□ 1.84
SURF1-205ENST00000615505 GANQ9H2C0 597 aa26.56■■□□□ 1.84
SURF1-205ENST00000615505 MARCH2Q9P0N8 246 aa26.56■■□□□ 1.84
SURF1-205ENST00000615505 SIK3Q9Y2K2 1263 aa26.56■■□□□ 1.84
SURF1-205ENST00000615505 MUC6Q6W4X9 2439 aa26.55■■□□□ 1.84
SURF1-205ENST00000615505 TRDMT1O14717 391 aaKnown RBP26.55■■□□□ 1.84
SURF1-205ENST00000615505 SART1O43290 800 aaKnown RBP26.55■■□□□ 1.84
SURF1-205ENST00000615505 CAVIN2O95810 425 aa26.55■■□□□ 1.84
SURF1-205ENST00000615505 CHRNB1P11230 501 aa26.55■■□□□ 1.84
SURF1-205ENST00000615505 KLK7P49862 253 aa26.55■■□□□ 1.84
SURF1-205ENST00000615505 POLR2FP61218 127 aaKnown RBP26.55■■□□□ 1.84
SURF1-205ENST00000615505 GRSF1Q12849 480 aaKnown RBP eCLIP26.55■■□□□ 1.844e-7■■■■□ 25.6
SURF1-205ENST00000615505 DHCR24Q15392 516 aa26.55■■□□□ 1.84
SURF1-205ENST00000615505 ZSCAN23Q3MJ62 389 aa26.55■■□□□ 1.84
SURF1-205ENST00000615505 SLC4A5Q9BY07 1137 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms