RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 ATG16L1Q676U5 607 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 LMBRD2Q68DH5 695 aaPredicted RBP11.66□□□□□ -0.54
ATF3-211ENST00000613954 BBS12Q6ZW61 710 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 OR6J1Q8NGC5 347 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 ACTL9Q8TC94 416 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 SLC44A1Q8WWI5 657 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 USP6NLQ92738 828 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 HAUS1Q96CS2 278 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 C7orf26Q96N11 449 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 ADAM33Q9BZ11 813 aa11.66□□□□□ -0.54
ATF3-211ENST00000613954 GOLGA8RI6L899 631 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 RTN3O95197 1032 aaPredicted RBP11.65□□□□□ -0.54
ATF3-211ENST00000613954 C22orf31O95567 290 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 INSRRP14616 1297 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 SERPINB4P48594 390 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 AP3M2P53677 418 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 SH3BGRP55822 239 aaPredicted RBP11.65□□□□□ -0.54
ATF3-211ENST00000613954 AP2B1P63010 937 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 TNFAIP2Q03169 654 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 PDCD2Q16342 344 aaPredicted RBP11.65□□□□□ -0.54
ATF3-211ENST00000613954 HADHQ16836 314 aaKnown RBP11.65□□□□□ -0.54
ATF3-211ENST00000613954 BBS9Q3SYG4 887 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 MSS51Q4VC12 460 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 PPP1R15BQ5SWA1 713 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 RNF220Q5VTB9 566 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 ANKRD22Q5VYY1 191 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 EFCAB12Q6NXP0 572 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 ZPBP2Q6X784 338 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 RNF149Q8NC42 400 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 WDR60Q8WVS4 1066 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 TTC17Q96AE7 1141 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 GBP5Q96PP8 586 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 FAM111AQ96PZ2 611 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 CGRRF1Q99675 332 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 C16orf70Q9BSU1 422 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 TARS2Q9BW92 718 aaKnown RBP11.65□□□□□ -0.54
ATF3-211ENST00000613954 MRPL4Q9BYD3 311 aaKnown RBP11.65□□□□□ -0.54
ATF3-211ENST00000613954 PPP1R12CQ9BZL4 782 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 WWP1Q9H0M0 922 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 FBXO6Q9NRD1 293 aaPredicted RBP11.65□□□□□ -0.54
ATF3-211ENST00000613954 RBAKQ9NYW8 714 aaPredicted RBP11.65□□□□□ -0.54
ATF3-211ENST00000613954 CNTN3Q9P232 1028 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 XPO7Q9UIA9 1087 aaKnown RBP11.65□□□□□ -0.54
ATF3-211ENST00000613954 A0A0B4J269 797 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 B2RBV5 119 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 COPEO14579 308 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 UPP2O95045 317 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 MMP3P08254 477 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 ZNF286BP0CG31 522 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 SRGAP2CP0DJJ0 459 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 BGNP21810 368 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 EIF4BP23588 611 aaKnown RBP11.65□□□□□ -0.54
ATF3-211ENST00000613954 RPL22P35268 128 aaKnown RBP11.65□□□□□ -0.54
ATF3-211ENST00000613954 RGS2P41220 211 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 NLRP11P59045 1033 aaKnown RBP11.65□□□□□ -0.54
ATF3-211ENST00000613954 CBLBQ13191 982 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 DGKDQ16760 1214 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 LGSNQ5TDP6 509 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 RAB3IL1Q8TBN0 382 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 DTX3LQ8TDB6 740 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 SOCS4Q8WXH5 440 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 FAM161BQ96MY7 647 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 KLF6Q99612 283 aaPredicted RBP11.65□□□□□ -0.54
ATF3-211ENST00000613954 MSTO1Q9BUK6 570 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 FRMD8Q9BZ67 464 aaPredicted RBP11.65□□□□□ -0.54
ATF3-211ENST00000613954 GPAMQ9HCL2 828 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 KRT82Q9NSB4 513 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 IL1RAPL1Q9NZN1 696 aa11.65□□□□□ -0.54
ATF3-211ENST00000613954 ABT1Q9ULW3 272 aaKnown RBP11.65□□□□□ -0.54
ATF3-211ENST00000613954 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.64□□□□□ -0.55
ATF3-211ENST00000613954 C3orf70A6NLC5 250 aaPredicted RBP11.64□□□□□ -0.55
ATF3-211ENST00000613954 SPECC1L-ADORA2AF8WAN1 911 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 H3BRB1 525 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 CST8O60676 142 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 MSCO60682 206 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 TM7SF2O76062 418 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 EDN1P05305 212 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 PRKCBP05771 671 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 POLR2BP30876 1174 aaKnown RBP11.64□□□□□ -0.55
ATF3-211ENST00000613954 CDH5P33151 784 aaPredicted RBP11.64□□□□□ -0.55
ATF3-211ENST00000613954 TM4SF4P48230 202 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 CLCN3P51790 818 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 IGBP1P78318 339 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 OGDHQ02218 1023 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 DSG1Q02413 1049 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 TAZQ16635 292 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 TTC39BQ5VTQ0 682 aaPredicted RBP11.64□□□□□ -0.55
ATF3-211ENST00000613954 OLFML2BQ68BL8 750 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 SH2D5Q6ZV89 423 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 SCUBE1Q8IWY4 988 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 UBR7Q8N806 425 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 FNIP1Q8TF40 1166 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 HHIPL1Q96JK4 782 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 ZBTB45Q96K62 511 aaPredicted RBP11.64□□□□□ -0.55
ATF3-211ENST00000613954 WDR83Q9BRX9 315 aaKnown RBP11.64□□□□□ -0.55
ATF3-211ENST00000613954 HAPLN2Q9GZV7 340 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 C1orf21Q9H246 121 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 TUT1Q9H6E5 874 aaKnown RBP11.64□□□□□ -0.55
ATF3-211ENST00000613954 PNPLA8Q9NP80 782 aa11.64□□□□□ -0.55
ATF3-211ENST00000613954 METTL5Q9NRN9 209 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms