RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 RALAP11233 206 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 TPI1P60174 286 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 ATXN3LQ9H3M9 355 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 MINDY3Q9H8M7 445 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 SLC28A3Q9HAS3 691 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 XPNPEP1Q9NQW7 623 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 TUBGCP4Q9UGJ1 667 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 ANAPC5Q9UJX4 755 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 RASA4BC9J798 803 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 PODXLO00592 558 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 SLC16A3O15427 465 aaKnown RBP11.26□□□□□ -0.61
FAM3A-221ENST00000612856 RASA4O43374 803 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 DNAJC6O75061 913 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 SUPT3HO75486 399 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 GARTP22102 1010 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 CALB2P22676 271 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 CA4P22748 312 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 PTENP60484 403 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 PTPN11Q06124 597 aaPredicted RBP11.26□□□□□ -0.61
FAM3A-221ENST00000612856 FOXD4Q12950 439 aaPredicted RBP11.26□□□□□ -0.61
FAM3A-221ENST00000612856 DDR2Q16832 855 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 CDCA2Q69YH5 1023 aaPredicted RBP11.26□□□□□ -0.61
FAM3A-221ENST00000612856 MORC4Q8TE76 937 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 ARNTL2Q8WYA1 636 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 RBM41Q96IZ5 413 aaKnown RBP11.26□□□□□ -0.61
FAM3A-221ENST00000612856 MUC3BQ9H195 1237 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 PLEKHA5Q9HAU0 1116 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 ALG6Q9Y672 507 aa11.26□□□□□ -0.61
FAM3A-221ENST00000612856 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.26□□□□□ -0.61
FAM3A-221ENST00000612856 ASTN1O14525 1302 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 SLC12A8A0AV02 714 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 CIB2O75838 187 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 SNAI1O95863 264 aaPredicted RBP11.25□□□□□ -0.61
FAM3A-221ENST00000612856 CST3P01034 146 aaPredicted RBP11.25□□□□□ -0.61
FAM3A-221ENST00000612856 RARAP10276 462 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 MBL2P11226 248 aaPredicted RBP11.25□□□□□ -0.61
FAM3A-221ENST00000612856 CCL5P13501 91 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 PEX5P50542 639 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 TKTL1P51854 596 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 BTKQ06187 659 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 ADIGQ0VDE8 80 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 TWF1Q12792 350 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 SNX30Q5VWJ9 437 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 PLPP4Q5VZY2 271 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 NIPA1Q7RTP0 329 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 DCP1BQ8IZD4 617 aaKnown RBP11.25□□□□□ -0.61
FAM3A-221ENST00000612856 ZNF606Q8WXB4 792 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 CELF6Q96J87 481 aaKnown RBP11.25□□□□□ -0.61
FAM3A-221ENST00000612856 NDNQ99608 321 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 MMADHCQ9H3L0 296 aaPredicted RBP11.25□□□□□ -0.61
FAM3A-221ENST00000612856 SP110Q9HB58 689 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 PLK2Q9NYY3 685 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 UBP1Q9NZI7 540 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 FAF1Q9UNN5 650 aaPredicted RBP11.25□□□□□ -0.61
FAM3A-221ENST00000612856 MYADML2A6NDP7 307 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 TGFB1I1O43294 461 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 SH3BP5O60239 455 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 ABL2P42684 1182 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 TUBP50607 506 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 ZNF268Q14587 947 aaPredicted RBP11.25□□□□□ -0.61
FAM3A-221ENST00000612856 ANO7Q6IWH7 933 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 TPGS1Q6ZTW0 290 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 ZNF571Q7Z3V5 609 aaPredicted RBP11.25□□□□□ -0.61
FAM3A-221ENST00000612856 FITM2Q8N6M3 262 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 PIP4K2CQ8TBX8 421 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 RFFLQ8WZ73 363 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 BAP1Q92560 729 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 CGRRF1Q99675 332 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 LPIN3Q9BQK8 851 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 FSD1LQ9BXM9 530 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 CARD9Q9H257 536 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 PABPC3Q9H361 631 aaKnown RBP11.25□□□□□ -0.61
FAM3A-221ENST00000612856 C10orf88Q9H8K7 445 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 RNPEPL1Q9HAU8 725 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.25□□□□□ -0.61
FAM3A-221ENST00000612856 PARVAQ9NVD7 372 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 ZFP69BQ9UJL9 534 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 ASCC3Q8N3C0 2202 aaKnown RBP11.25□□□□□ -0.61
FAM3A-221ENST00000612856 LY75O60449 1722 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 TTC36A6NLP5 189 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 ZNF189O75820 626 aaPredicted RBP11.25□□□□□ -0.61
FAM3A-221ENST00000612856 SOAT2O75908 522 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 APRTP07741 180 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 USP17L7P0C7H9 530 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 OR1D2P34982 312 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 GPS1Q13098 491 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 KYNUQ16719 465 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 SH2D4BQ5SQS7 431 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 MAP4K3Q8IVH8 894 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 FAM81BQ96LP2 452 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 CDHR5Q9HBB8 845 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 CTNNAL1Q9UBT7 734 aa11.25□□□□□ -0.61
FAM3A-221ENST00000612856 MYH4Q9Y623 1939 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 TTLL13PA6NNM8 815 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 F8VP50 259 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 HNRNPRO43390 633 aaKnown RBP11.24□□□□□ -0.61
FAM3A-221ENST00000612856 KPNA6O60684 536 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 CREB1P16220 341 aa11.24□□□□□ -0.61
FAM3A-221ENST00000612856 AVPR1AP37288 418 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms