RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 TUBP50607 506 aa18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 SF3A1Q15459 793 aaKnown RBP18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 CBWD2Q8IUF1 395 aa18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 B3GALNT2Q8NCR0 500 aa18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 DNAJC19Q96DA6 116 aa18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 DUSP9Q99956 384 aaKnown RBP18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 BBS2Q9BXC9 721 aa18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 MIR1-1HGQ9H1L0 117 aa18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 CD248Q9HCU0 757 aa18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 CACNA2D2Q9NY47 1150 aa18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 CHORDC1Q9UHD1 332 aaPredicted RBP18.24■□□□□ 0.51
CSNK1E-215ENST00000612795 SETXQ7Z333 2677 aaKnown RBP18.23■□□□□ 0.51
CSNK1E-215ENST00000612795 CACNG3O60359 315 aa18.23■□□□□ 0.51
CSNK1E-215ENST00000612795 NCAM1P13591 858 aa18.23■□□□□ 0.51
CSNK1E-215ENST00000612795 TYRP14679 529 aa18.23■□□□□ 0.51
CSNK1E-215ENST00000612795 TXLNAP40222 546 aa18.23■□□□□ 0.51
CSNK1E-215ENST00000612795 RRAGBQ5VZM2 374 aa18.23■□□□□ 0.51
CSNK1E-215ENST00000612795 USP49Q70CQ1 688 aa18.23■□□□□ 0.51
CSNK1E-215ENST00000612795 TMPRSS7Q7RTY8 843 aa18.23■□□□□ 0.51
CSNK1E-215ENST00000612795 TRAPPC11Q7Z392 1133 aa18.23■□□□□ 0.51
CSNK1E-215ENST00000612795 MED10Q9BTT4 135 aa18.23■□□□□ 0.51
CSNK1E-215ENST00000612795 B3GNT5Q9BYG0 378 aa18.23■□□□□ 0.51
CSNK1E-215ENST00000612795 FGFBP2Q9BYJ0 223 aa18.23■□□□□ 0.51
CSNK1E-215ENST00000612795 GAREM1Q9H706 876 aa18.23■□□□□ 0.51
CSNK1E-215ENST00000612795 GMIPQ9P107 970 aa18.23■□□□□ 0.51
CSNK1E-215ENST00000612795 KIAA1522Q9P206 1035 aaPredicted RBP18.23■□□□□ 0.51
CSNK1E-215ENST00000612795 CLSTN1O94985 981 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 DLATP10515 647 aaKnown RBP18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 TNNI1P19237 187 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 MATKP42679 507 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 SLC5A3P53794 718 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 STARD3Q14849 445 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 WDR72Q3MJ13 1102 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 TPGS1Q6ZTW0 290 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 STXBP4Q6ZWJ1 553 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 GLIS3Q8NEA6 775 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 SCAMP5Q8TAC9 235 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 WBP2Q969T9 261 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 TOE1Q96GM8 510 aaKnown RBP18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 KCNK16Q96T55 309 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 GPR174Q9BXC1 333 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 IL21RQ9HBE5 538 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 TM7SF3Q9NS93 570 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 DKK4Q9UBT3 224 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 LSM7Q9UK45 103 aaKnown RBP18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 CKAP5Q14008 2032 aa18.22■□□□□ 0.51
CSNK1E-215ENST00000612795 GOLGA8CPA6NN73 597 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 PRRT4C9JH25 899 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 GFRA2O00451 464 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 ZNF883P0CG24 379 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 DGKGP49619 791 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 GOLGA8FQ08AF8 430 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 GOLGA8DPQ0D2H9 430 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 SNX30Q5VWJ9 437 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 BRAPQ7Z569 592 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 FAM35AQ86V20 835 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 DNASE2BQ8WZ79 361 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 KIF2CQ99661 725 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 CDC6Q99741 560 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 PRDM16Q9HAZ2 1276 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 DMAP1Q9NPF5 467 aaPredicted RBP18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 PANK4Q9NVE7 773 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 HSPBP1Q9NZL4 362 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 WDR35Q9P2L0 1181 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 NFE2L3Q9Y4A8 694 aa18.21■□□□□ 0.51
CSNK1E-215ENST00000612795 FLRT2O43155 660 aa18.2■□□□□ 0.5
CSNK1E-215ENST00000612795 TLR5O60602 858 aa18.2■□□□□ 0.5
CSNK1E-215ENST00000612795 CILPO75339 1184 aa18.2■□□□□ 0.5
CSNK1E-215ENST00000612795 FAM163BP0C2L3 166 aa18.2■□□□□ 0.5
CSNK1E-215ENST00000612795 DCAF12L1Q5VU92 463 aa18.2■□□□□ 0.5
CSNK1E-215ENST00000612795 IL27RAQ6UWB1 636 aa18.2■□□□□ 0.5
CSNK1E-215ENST00000612795 GALNT15Q8N3T1 639 aa18.2■□□□□ 0.5
CSNK1E-215ENST00000612795 RHBDD1Q8TEB9 315 aa18.2■□□□□ 0.5
CSNK1E-215ENST00000612795 SMARCD1Q96GM5 515 aa18.2■□□□□ 0.5
CSNK1E-215ENST00000612795 KIAA1586Q9HCI6 787 aa18.2■□□□□ 0.5
CSNK1E-215ENST00000612795 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.2■□□□□ 0.5
CSNK1E-215ENST00000612795 WSB2Q9NYS7 404 aaPredicted RBP18.2■□□□□ 0.5
CSNK1E-215ENST00000612795 MARK1Q9P0L2 795 aa18.2■□□□□ 0.5
CSNK1E-215ENST00000612795 NXF1Q9UBU9 619 aaKnown RBP18.2■□□□□ 0.5
CSNK1E-215ENST00000612795 FNDC3AQ9Y2H6 1198 aaKnown RBP18.2■□□□□ 0.5
CSNK1E-215ENST00000612795 FRMD3A2A2Y4 597 aa18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 WASH3PC4AMC7 463 aa18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 BCAT2O15382 392 aaPredicted RBP18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 CST3P01034 146 aaPredicted RBP18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 ATXN1LP0C7T5 689 aaKnown RBP18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 STAT6P42226 847 aa18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 CYP4F3Q08477 520 aa18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 TRPC3Q13507 836 aa18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 FUT11Q495W5 492 aa18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 HTR3DQ70Z44 454 aa18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 CCDC65Q8IXS2 484 aa18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 CADM4Q8NFZ8 388 aa18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 BAHD1Q8TBE0 780 aaPredicted RBP18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 BHMTQ93088 406 aa18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 CGRRF1Q99675 332 aa18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 TLR8Q9NR97 1041 aaKnown RBP18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 KRT82Q9NSB4 513 aa18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 COMMD8Q9NX08 183 aa18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 USP36Q9P275 1121 aaKnown RBP18.19■□□□□ 0.5
CSNK1E-215ENST00000612795 SMC3Q9UQE7 1217 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms