RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 CRLF3Q8IUI8 442 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 TMEM126BQ8IUX1 230 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 PPIL6Q8IXY8 311 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 ACTRT2Q8TDY3 377 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 PRPF31Q8WWY3 499 aaKnown RBP12.39□□□□□ -0.43
TP53-220ENST00000610623 E2F7Q96AV8 911 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 ACAP3Q96P50 834 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 GCNAQ96QF7 691 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 RMI1Q9H9A7 625 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 ARHGEF38Q9NXL2 777 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 LTBP3Q9NS15 1303 aa12.39□□□□□ -0.43
TP53-220ENST00000610623 KANSL1LA0AUZ9 987 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 MAGEB3O15480 346 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 KLHL2O95198 593 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 RAG1P15918 1043 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 CD58P19256 250 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 PCSK6P29122 969 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 MLH1P40692 756 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 ALDH1A3P47895 512 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 TMPRSS15P98073 1019 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 BST1Q10588 318 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 WASHC5Q12768 1159 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 PTK7Q13308 1070 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 APOFQ13790 326 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 OASLQ15646 514 aaKnown RBP12.38□□□□□ -0.43
TP53-220ENST00000610623 LDHDQ86WU2 507 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 ZNF677Q86XU0 584 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 TPH2Q8IWU9 490 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 SAMD3Q8N6K7 520 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 XXYLT1Q8NBI6 393 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 NKD2Q969F2 451 aaPredicted RBP12.38□□□□□ -0.43
TP53-220ENST00000610623 SERAC1Q96JX3 654 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 RILPQ96NA2 401 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 BIRC8Q96P09 236 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 OXCT2Q9BYC2 517 aaPredicted RBP12.38□□□□□ -0.43
TP53-220ENST00000610623 WDR11Q9BZH6 1224 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 MRPL47Q9HD33 250 aaKnown RBP12.38□□□□□ -0.43
TP53-220ENST00000610623 UBAP1Q9NZ09 502 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 INPP5FQ9Y2H2 1132 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.38□□□□□ -0.43
TP53-220ENST00000610623 SDR42E2A6NKP2 422 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 COPEO14579 308 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 STK10O94804 968 aaKnown RBP12.38□□□□□ -0.43
TP53-220ENST00000610623 ICAM1P05362 532 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 C6orf222P0C671 652 aaPredicted RBP12.38□□□□□ -0.43
TP53-220ENST00000610623 TAL1P17542 331 aaPredicted RBP12.38□□□□□ -0.43
TP53-220ENST00000610623 CDH2P19022 906 aaPredicted RBP12.38□□□□□ -0.43
TP53-220ENST00000610623 GPC3P51654 580 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 SLC25A3Q00325 362 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 PDCD4Q53EL6 469 aaKnown RBP12.38□□□□□ -0.43
TP53-220ENST00000610623 DHRS4L2Q6PKH6 230 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 PACS1Q6VY07 963 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 PATL1Q86TB9 770 aaKnown RBP12.38□□□□□ -0.43
TP53-220ENST00000610623 KBTBD6Q86V97 674 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 CCDC33Q8N5R6 958 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 FBXO36Q8NEA4 188 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 CATSPER1Q8NEC5 780 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 PLEKHO2Q8TD55 490 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 HSPBAP1Q96EW2 488 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 MRPL1Q9BYD6 325 aaKnown RBP12.38□□□□□ -0.43
TP53-220ENST00000610623 PCIF1Q9H4Z3 704 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 STN1Q9H668 368 aaKnown RBP12.38□□□□□ -0.43
TP53-220ENST00000610623 PLGRKTQ9HBL7 147 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 RAB20Q9NX57 234 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 ITGA11Q9UKX5 1188 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 FAF1Q9UNN5 650 aaPredicted RBP12.38□□□□□ -0.43
TP53-220ENST00000610623 EXOC7Q9UPT5 735 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 COQ4Q9Y3A0 265 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 ZNF711Q9Y462 761 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 DOCK1Q14185 1865 aa12.38□□□□□ -0.43
TP53-220ENST00000610623 SMCHD1A6NHR9 2005 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 ASTN2O75129 1339 aaPredicted RBP12.37□□□□□ -0.43
TP53-220ENST00000610623 CAPN8A6NHC0 703 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 HOXA2O43364 376 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 BANF1O75531 89 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 PSMD10O75832 226 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 INHBAP08476 426 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 COPAP53621 1224 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 HDAC4P56524 1084 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 SNRPFP62306 86 aaKnown RBP12.37□□□□□ -0.43
TP53-220ENST00000610623 ZYXQ15942 572 aaKnown RBP12.37□□□□□ -0.43
TP53-220ENST00000610623 CNGA3Q16281 694 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 RABGAP1LQ5R372 815 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 FNBP1LQ5T0N5 605 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 LIN9Q5TKA1 542 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 MCF2L2Q86YR7 1114 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 RHPN2Q8IUC4 686 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 SLC44A1Q8WWI5 657 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 DCUN1D1Q96GG9 259 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 VPS50Q96JG6 964 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 NT5C1BQ96P26 610 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 NACC1Q96RE7 527 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 SRPK1Q96SB4 655 aaKnown RBP12.37□□□□□ -0.43
TP53-220ENST00000610623 MPHOSPH6Q99547 160 aaKnown RBP12.37□□□□□ -0.43
TP53-220ENST00000610623 WDR18Q9BV38 432 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 ZNF341Q9BYN7 854 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 SMYD3Q9H7B4 428 aa12.37□□□□□ -0.43
TP53-220ENST00000610623 SIRPGQ9P1W8 387 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms