RNA–Protein interactions for RNA: ENST00000608623.1

LINC01278-202, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

Gene LINC01278, Length 5,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-202ENST00000608623 DNAJC16Q9Y2G8 782 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 YBX2Q9Y2T7 364 aaKnown RBP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 USP27XA6NNY8 438 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 F5H423 210 aaPredicted RBP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 STX7O15400 261 aaKnown RBP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 MBTPS2O43462 519 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 PYGBP11216 843 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 SRFP11831 508 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 GRM5P41594 1212 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 SKP1P63208 163 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 TROAPQ12815 778 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 RRP1BQ14684 758 aaKnown RBP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 ACAP2Q15057 778 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 PTPN21Q16825 1174 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 Q4G0T1 1027 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 PLEKHG4Q58EX7 1191 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 TFDP3Q5H9I0 405 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 HLA-DQA1Q5Y7H0 255 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 TTC19Q6DKK2 380 aaPredicted RBP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 ZPBP2Q6X784 338 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 CTAGE3PQ8IX95 158 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 CEP112Q8N8E3 955 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 WFIKKN2Q8TEU8 576 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 C2orf15Q8WU43 125 aaKnown RBP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 CLIP3Q96DZ5 547 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 MTMR8Q96EF0 704 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 VMP1Q96GC9 406 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 MRFAP1L1Q96HT8 127 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 EPSTI1Q96J88 318 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 SMG9Q9H0W8 520 aaKnown RBP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 SMYD2Q9NRG4 433 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 GJB4Q9NTQ9 266 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 AGPAT5Q9NUQ2 364 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 FBXL5Q9UKA1 691 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 LCHNA4D1U4 455 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 TGM5O43548 720 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 RAMP2O60895 175 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 ADAMTS4O75173 837 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 CHRNA1P02708 482 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 EIF2S1P05198 315 aaKnown RBP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 ITGB5P18084 799 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 PAMP19021 973 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 MUTP22033 750 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 ALAS2P22557 587 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 GLRA2P23416 452 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 CYP2F1P24903 491 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 KRT20P35900 424 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 FXR1P51114 621 aaKnown RBP eCLIP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 VCPP55072 806 aaKnown RBP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 IL9RQ01113 521 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 OC90Q02509 493 aaPredicted RBP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 CAPSQ13938 189 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 MESDQ14696 234 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 XKR4Q5GH76 650 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 IRGCQ6NXR0 463 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 TAPT1Q6NXT6 567 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 FAM43BQ6ZT52 329 aaPredicted RBP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 GKN2Q86XP6 184 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 SPPL3Q8TCT6 385 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 IGDCC4Q8TDY8 1250 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 HDAC7Q8WUI4 952 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 SCYL1Q96KG9 808 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 NUDCD1Q96RS6 583 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 CDT1Q9H211 546 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 COG4Q9H9E3 785 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 COPS7BQ9H9Q2 264 aaPredicted RBP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 LRRC4CQ9HCJ2 640 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 ZSCAN32Q9NX65 697 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 SPASTQ9UBP0 616 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 TBX21Q9UL17 535 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 ZNF148Q9UQR1 794 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 TDRKHQ9Y2W6 561 aaKnown RBP3.82□□□□□ -1.8
LINC01278-202ENST00000608623 SCINQ9Y6U3 715 aa3.82□□□□□ -1.8
LINC01278-202ENST00000608623 CNTNAP5Q8WYK1 1306 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 SYNDIG1LA6NDD5 238 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 MUSKO15146 869 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 SLC37A4O43826 429 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 CLASP2O75122 1294 aaKnown RBP3.81□□□□□ -1.8
LINC01278-202ENST00000608623 CNTN5O94779 1100 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 CORO1AP31146 461 aaKnown RBP3.81□□□□□ -1.8
LINC01278-202ENST00000608623 GUCY1A2P33402 732 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 ABCG1P45844 678 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 GHRHRQ02643 423 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 ZRANB3Q5FWF4 1079 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 CCDC183Q5T5S1 534 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 LAYNQ6UX15 382 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 TRAPPC11Q7Z392 1133 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 PHYKPLQ8IUZ5 450 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 MMAAQ8IVH4 418 aaKnown RBP3.81□□□□□ -1.8
LINC01278-202ENST00000608623 OXR1Q8N573 874 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 MLKLQ8NB16 471 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 RBBP8NLQ8NC74 664 aaPredicted RBP3.81□□□□□ -1.8
LINC01278-202ENST00000608623 TRPV1Q8NER1 839 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 VN1R2Q8NFZ6 395 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 METTL21AQ8WXB1 218 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 ZBTB45Q96K62 511 aaPredicted RBP3.81□□□□□ -1.8
LINC01278-202ENST00000608623 CDC6Q99741 560 aa3.81□□□□□ -1.8
LINC01278-202ENST00000608623 COL25A1Q9BXS0 654 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms