RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 PKN3Q6P5Z2 889 aa20.2■□□□□ 0.82
CTSA-217ENST00000607482 TTC30AQ86WT1 665 aa20.2■□□□□ 0.82
CTSA-217ENST00000607482 SIX6OS1Q8N1H7 587 aa20.2■□□□□ 0.82
CTSA-217ENST00000607482 CAMKK1Q8N5S9 505 aa20.2■□□□□ 0.82
CTSA-217ENST00000607482 NAT16Q8N8M0 369 aa20.2■□□□□ 0.82
CTSA-217ENST00000607482 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.2■□□□□ 0.82
CTSA-217ENST00000607482 DEC1Q9P2X7 70 aa20.2■□□□□ 0.82
CTSA-217ENST00000607482 RASAL2Q9UJF2 1139 aa20.2■□□□□ 0.82
CTSA-217ENST00000607482 TSPAN16Q9UKR8 245 aa20.2■□□□□ 0.82
CTSA-217ENST00000607482 USP18Q9UMW8 372 aa20.2■□□□□ 0.82
CTSA-217ENST00000607482 TBC1D3BA6NDS4 549 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 HOXA6P31267 233 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 OPRD1P41143 372 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 SLC6A11P48066 632 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 PGFP49763 221 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 BST2Q10589 180 aaKnown RBP20.19■□□□□ 0.82
CTSA-217ENST00000607482 DMC1Q14565 340 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 LAIR1Q6GTX8 287 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 KLHDC10Q6PID8 442 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 SYT13Q7L8C5 426 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 WDR5BQ86VZ2 330 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 UBA3Q8TBC4 463 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 ZFRQ96KR1 1074 aaKnown RBP20.19■□□□□ 0.82
CTSA-217ENST00000607482 HHIPQ96QV1 700 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 KLF16Q9BXK1 252 aaPredicted RBP20.19■□□□□ 0.82
CTSA-217ENST00000607482 NMUR1Q9HB89 426 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 SPHK2Q9NRA0 654 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 CLIC5Q9NZA1 410 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 RWDD2AQ9UIY3 292 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 WDR87Q6ZQQ6 2873 aa20.19■□□□□ 0.82
CTSA-217ENST00000607482 MDM4O15151 490 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 PMM2O15305 246 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 RPP40O75818 363 aaKnown RBP20.18■□□□□ 0.82
CTSA-217ENST00000607482 KAT7O95251 611 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 APBB3O95704 486 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 ZBED1O96006 694 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 HMBSP08397 361 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 PAEPP09466 180 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 KRT5P13647 590 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 EIF2DP41214 584 aaKnown RBP20.18■□□□□ 0.82
CTSA-217ENST00000607482 GRIA2P42262 883 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 YWHAGP61981 247 aaKnown RBP eCLIP20.18■□□□□ 0.82
CTSA-217ENST00000607482 COG7P83436 770 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 EFEMP1Q12805 493 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 SRSF5Q13243 272 aaKnown RBP20.18■□□□□ 0.82
CTSA-217ENST00000607482 HTR3DQ70Z44 454 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 RRAGAQ7L523 313 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 EHBP1Q8NDI1 1231 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 TSTD1Q8NFU3 115 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 RNF139Q8WU17 664 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 XPO6Q96QU8 1125 aaKnown RBP20.18■□□□□ 0.82
CTSA-217ENST00000607482 BBS2Q9BXC9 721 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 OSER1Q9NX31 292 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 WDR35Q9P2L0 1181 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 USP3Q9Y6I4 520 aa20.18■□□□□ 0.82
CTSA-217ENST00000607482 NEDD8-MDP1E9PL57 170 aa20.17■□□□□ 0.82
CTSA-217ENST00000607482 XPO1O14980 1071 aaKnown RBP20.17■□□□□ 0.82
CTSA-217ENST00000607482 HRO43593 1189 aa20.17■□□□□ 0.82
CTSA-217ENST00000607482 SETSIPP0DME0 302 aa20.17■□□□□ 0.82
CTSA-217ENST00000607482 PDE4CQ08493 712 aa20.17■□□□□ 0.82
CTSA-217ENST00000607482 TPGS1Q6ZTW0 290 aa20.17■□□□□ 0.82
CTSA-217ENST00000607482 TMEM25Q86YD3 366 aa20.17■□□□□ 0.82
CTSA-217ENST00000607482 TRIM59Q8IWR1 403 aa20.17■□□□□ 0.82
CTSA-217ENST00000607482 CCDC33Q8N5R6 958 aa20.17■□□□□ 0.82
CTSA-217ENST00000607482 MLKLQ8NB16 471 aa20.17■□□□□ 0.82
CTSA-217ENST00000607482 GOLGA1Q92805 767 aa20.17■□□□□ 0.82
CTSA-217ENST00000607482 DACH1Q9UI36 760 aa20.17■□□□□ 0.82
CTSA-217ENST00000607482 ZNF510Q9Y2H8 683 aa20.17■□□□□ 0.82
CTSA-217ENST00000607482 EP300Q09472 2414 aaPredicted RBP20.17■□□□□ 0.82
CTSA-217ENST00000607482 FANCMQ8IYD8 2048 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 CCDC163A0A0D9SF12 145 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 K7EQS6 105 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 AXIN1O15169 862 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 ALDH1A2O94788 518 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 LCP1P13796 627 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 TIE1P35590 1138 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 TNFRSF4P43489 277 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 MTIF2P46199 727 aaKnown RBP20.16■□□□□ 0.82
CTSA-217ENST00000607482 ID4P47928 161 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 MRPS21P82921 87 aaKnown RBP20.16■□□□□ 0.82
CTSA-217ENST00000607482 ADIGQ0VDE8 80 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 STILQ15468 1287 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 SCD5Q86SK9 330 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 USP33Q8TEY7 942 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 ULBP1Q9BZM6 244 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 DCLK3Q9C098 648 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 INTS2Q9H0H0 1204 aaKnown RBP20.16■□□□□ 0.82
CTSA-217ENST00000607482 DNAJC17Q9NVM6 304 aaKnown RBP20.16■□□□□ 0.82
CTSA-217ENST00000607482 POLR3BQ9NW08 1133 aaPredicted RBP20.16■□□□□ 0.82
CTSA-217ENST00000607482 MARCH2Q9P0N8 246 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 MYO16Q9Y6X6 1858 aa20.16■□□□□ 0.82
CTSA-217ENST00000607482 M0QYV0 167 aa20.15■□□□□ 0.82
CTSA-217ENST00000607482 ZBTB24O43167 697 aaPredicted RBP20.15■□□□□ 0.82
CTSA-217ENST00000607482 HOXC11O43248 304 aaPredicted RBP20.15■□□□□ 0.82
CTSA-217ENST00000607482 RETP07949 1114 aa20.15■□□□□ 0.82
CTSA-217ENST00000607482 DGKEP52429 567 aa20.15■□□□□ 0.82
CTSA-217ENST00000607482 GCNT1Q02742 428 aa20.15■□□□□ 0.82
CTSA-217ENST00000607482 GRAMD4Q6IC98 578 aa20.15■□□□□ 0.82
CTSA-217ENST00000607482 CACNA2D4Q7Z3S7 1137 aa20.15■□□□□ 0.82
CTSA-217ENST00000607482 RBBP8NLQ8NC74 664 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms