RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 TOB2Q14106 344 aaPredicted RBP9.17□□□□□ -0.94
COMMD3-215ENST00000602574 TFDP1Q14186 410 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 MAPK6Q16659 721 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 OGFOD2Q6N063 350 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 C16orf54Q6UWD8 224 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 RNF19BQ6ZMZ0 732 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 PRR23BQ6ZRT6 265 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 DHDDSQ86SQ9 333 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 GPR180Q86V85 440 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 RHPN1Q8TCX5 695 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 U2AF1L4Q8WU68 220 aaKnown RBP9.17□□□□□ -0.94
COMMD3-215ENST00000602574 LPGAT1Q92604 370 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 FAM89AQ96GI7 184 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 RMDN3Q96TC7 470 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 MCMBPQ9BTE3 642 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 MLPHQ9BV36 600 aaPredicted RBP9.17□□□□□ -0.94
COMMD3-215ENST00000602574 USP44Q9H0E7 712 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 WNT8AQ9H1J5 351 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 ZNF69Q9UC07 566 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 FBXO40Q9UH90 709 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 NRCAMQ92823 1304 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 USP54Q70EL1 1684 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 CPS1P31327 1500 aa9.17□□□□□ -0.94
COMMD3-215ENST00000602574 ESYT3A0FGR9 886 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 UGT1A9O60656 530 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 PRMT3O60678 531 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 UBTFL1P0CB47 393 aaPredicted RBP9.16□□□□□ -0.94
COMMD3-215ENST00000602574 SRGNP10124 158 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 DBTP11182 482 aaKnown RBP9.16□□□□□ -0.94
COMMD3-215ENST00000602574 UGT1A6P19224 532 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 UGT1A1P22309 533 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 UGT1A4P22310 534 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 TTKP33981 857 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 UGT1A3P35503 534 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 UGT1A5P35504 534 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 ADD2P35612 726 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 PRKCIP41743 596 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 HK2P52789 917 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 RAB14P61106 215 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 FMR1Q06787 632 aaKnown RBP eCLIP9.16□□□□□ -0.94
COMMD3-215ENST00000602574 LGALS3BPQ08380 585 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 SNAPC2Q13487 334 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 BLOC1S2Q6QNY1 142 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 LRRC6Q86X45 466 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 SULF1Q8IWU6 871 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 OR8H1Q8NGG4 311 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 GOT1L1Q8NHS2 421 aaPredicted RBP9.16□□□□□ -0.94
COMMD3-215ENST00000602574 DTX3LQ8TDB6 740 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 CPLX3Q8WVH0 158 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 MARC2Q969Z3 335 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 CLSTN3Q9BQT9 956 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 METTL22Q9BUU2 404 aaPredicted RBP9.16□□□□□ -0.94
COMMD3-215ENST00000602574 ROPN1BQ9BZX4 212 aaPredicted RBP9.16□□□□□ -0.94
COMMD3-215ENST00000602574 ROPN1Q9HAT0 212 aaPredicted RBP9.16□□□□□ -0.94
COMMD3-215ENST00000602574 UGT1A7Q9HAW7 530 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 UGT1A10Q9HAW8 530 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 UGT1A8Q9HAW9 530 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 PCDH12Q9NPG4 1184 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 PARVAQ9NVD7 372 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 DAPK2Q9UIK4 370 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 APPL1Q9UKG1 709 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 A0A1W2PQC6 194 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 ZSCAN5CA6NGD5 496 aaPredicted RBP9.16□□□□□ -0.94
COMMD3-215ENST00000602574 KLRF2D3W0D1 207 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 RAD51CO43502 376 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 DYRK3O43781 588 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 PPP6R2O75170 966 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 SLITRK5O94991 958 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 HOXB7P09629 217 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 C6orf222P0C671 652 aaPredicted RBP9.16□□□□□ -0.94
COMMD3-215ENST00000602574 SLC2A3P11169 496 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 NPR3P17342 541 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 ATF4P18848 351 aaPredicted RBP9.16□□□□□ -0.94
COMMD3-215ENST00000602574 BMP6P22004 513 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 CDH5P33151 784 aaPredicted RBP9.16□□□□□ -0.94
COMMD3-215ENST00000602574 NAMPTP43490 491 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 SLC12A2P55011 1212 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 STX17P56962 302 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 ACTR3P61158 418 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 MDM2Q00987 491 aaPredicted RBP9.16□□□□□ -0.94
COMMD3-215ENST00000602574 DLG1Q12959 904 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 CDK10Q15131 360 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 DALRD3Q5D0E6 543 aaKnown RBP9.16□□□□□ -0.94
COMMD3-215ENST00000602574 TMEM126BQ8IUX1 230 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 TBC1D21Q8IYX1 336 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 MAP4K1Q92918 833 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 MCUR1Q96AQ8 359 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 THAP11Q96EK4 314 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 HS6ST2Q96MM7 605 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 CPNE5Q9HCH3 593 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 CHST12Q9NRB3 414 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 CEP72Q9P209 647 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 TINAGQ9UJW2 476 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 FBXO2Q9UK22 296 aaPredicted RBP9.16□□□□□ -0.94
COMMD3-215ENST00000602574 MAN1B1Q9UKM7 699 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.16□□□□□ -0.94
COMMD3-215ENST00000602574 SLC12A7Q9Y666 1083 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 TECPR2O15040 1411 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 DIP2CQ9Y2E4 1556 aa9.16□□□□□ -0.94
COMMD3-215ENST00000602574 ESYT2A0FGR8 921 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms