RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 UGT1A7Q9HAW7 530 aa21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 UGT1A10Q9HAW8 530 aa21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 UGT1A8Q9HAW9 530 aa21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 PCDH18Q9HCL0 1135 aa21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 RGS17Q9UGC6 210 aaPredicted RBP21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 AKT3Q9Y243 479 aa21.02■□□□□ 0.96
SHKBP1-225ENST00000600733 COPEO14579 308 aa21.02■□□□□ 0.95
SHKBP1-225ENST00000600733 TNFAIP2Q03169 654 aa21.02■□□□□ 0.95
SHKBP1-225ENST00000600733 ZBTB16Q05516 673 aa21.02■□□□□ 0.95
SHKBP1-225ENST00000600733 TAF11Q15544 211 aa21.02■□□□□ 0.95
SHKBP1-225ENST00000600733 TTC7BQ86TV6 843 aa21.02■□□□□ 0.95
SHKBP1-225ENST00000600733 NT5C1AQ9BXI3 368 aa21.02■□□□□ 0.95
SHKBP1-225ENST00000600733 PNPLA8Q9NP80 782 aa21.02■□□□□ 0.95
SHKBP1-225ENST00000600733 SMYD2Q9NRG4 433 aa21.02■□□□□ 0.95
SHKBP1-225ENST00000600733 ETNK2Q9NVF9 386 aa21.02■□□□□ 0.95
SHKBP1-225ENST00000600733 DPP3Q9NY33 737 aa21.02■□□□□ 0.95
SHKBP1-225ENST00000600733 ERAP1Q9NZ08 941 aa21.02■□□□□ 0.95
SHKBP1-225ENST00000600733 OSBPP22059 807 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 CDK16Q00536 496 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 BMPR2Q13873 1038 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 FAM187BQ17R55 369 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 PPP6R3Q5H9R7 873 aaPredicted RBP21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 PPP1R26Q5T8A7 1209 aaPredicted RBP21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 OLFML1Q6UWY5 402 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 SCUBE3Q8IX30 993 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 CCDC33Q8N5R6 958 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 RTP4Q96DX8 246 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 SNRNP25Q9BV90 132 aaKnown RBP21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 IQCGQ9H095 443 aaKnown RBP21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 OTOFQ9HC10 1997 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 FAM237BA0A1B0GVD1 139 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 MYL2P10916 166 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 KCTD2Q14681 263 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 PDK2Q15119 407 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 WASHC2DQ5SRD0 308 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 MMP19Q99542 508 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 KLC2Q9H0B6 622 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 FAM49BQ9NUQ9 324 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 RBPJLQ9UBG7 517 aa21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 MTO1Q9Y2Z2 717 aaKnown RBP21.01■□□□□ 0.95
SHKBP1-225ENST00000600733 DNAJC25-GNG10A0A024R161 153 aa21■□□□□ 0.95
SHKBP1-225ENST00000600733 CCDC22O60826 627 aa21■□□□□ 0.95
SHKBP1-225ENST00000600733 TGDSO95455 350 aa21■□□□□ 0.95
SHKBP1-225ENST00000600733 TFE3P19532 575 aaPredicted RBP21■□□□□ 0.95
SHKBP1-225ENST00000600733 BOLA3Q53S33 107 aa21■□□□□ 0.95
SHKBP1-225ENST00000600733 DSTYKQ6XUX3 929 aa21■□□□□ 0.95
SHKBP1-225ENST00000600733 TTC30AQ86WT1 665 aa21■□□□□ 0.95
SHKBP1-225ENST00000600733 ENDOVQ8N8Q3 282 aaKnown RBP21■□□□□ 0.95
SHKBP1-225ENST00000600733 CLMNQ96JQ2 1002 aa21■□□□□ 0.95
SHKBP1-225ENST00000600733 BTBD10Q9BSF8 475 aa21■□□□□ 0.95
SHKBP1-225ENST00000600733 B3GNT5Q9BYG0 378 aa21■□□□□ 0.95
SHKBP1-225ENST00000600733 SLC13A1Q9BZW2 595 aa21■□□□□ 0.95
SHKBP1-225ENST00000600733 CXCL16Q9H2A7 254 aa21■□□□□ 0.95
SHKBP1-225ENST00000600733 SUFUQ9UMX1 484 aa21■□□□□ 0.95
SHKBP1-225ENST00000600733 CITO14578 2027 aa21■□□□□ 0.95
SHKBP1-225ENST00000600733 SCN1AP35498 2009 aa21■□□□□ 0.95
SHKBP1-225ENST00000600733 A0A0G2JLL6 359 aaPredicted RBP20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 HNRNPCL1O60812 293 aaKnown RBP20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 SLC25A27O95847 323 aa20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 SNRPAP09012 282 aaKnown RBP20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 TGM2P21980 687 aa20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 MRPS5P82675 430 aaKnown RBP20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 RBP5P82980 135 aa20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 SLC9A4Q6AI14 798 aa20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 C4orf50Q6ZRC1 276 aa20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 PRRT2Q7Z6L0 340 aaPredicted RBP20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 ACOT1Q86TX2 421 aa20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 KHSRPQ92945 711 aaKnown RBP eCLIP20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 MAGEB5Q9BZ81 275 aa20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 ITGA11Q9UKX5 1188 aa20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 BCLAF3A2AJT9 711 aaKnown RBP20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 SLC15A5A6NIM6 579 aa20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 DNAJC6O75061 913 aa20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 KRT37O76014 449 aa20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 SDC4P31431 198 aa20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 ARMC2Q8NEN0 867 aa20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 NAF1Q96HR8 494 aaKnown RBP20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 NSL1Q96IY1 281 aa20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 ARMCX1Q9P291 453 aa20.99■□□□□ 0.95
SHKBP1-225ENST00000600733 ADM5C9JUS6 153 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 GABBR2O75899 941 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 CSH1P0DML2 217 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 CSH2P0DML3 217 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 PRKCHP24723 683 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 KHDC1Q4VXA5 237 aaKnown RBP20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 CES4AQ5XG92 561 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 TRMT10BQ6PF06 316 aaKnown RBP20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 UNC5AQ6ZN44 842 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 RINLQ6ZS11 566 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 ALYREFQ86V81 257 aaKnown RBP20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 MPP5Q8N3R9 675 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 KIF12Q96FN5 646 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 MRPL45Q9BRJ2 306 aaKnown RBP20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 FAM167BQ9BTA0 163 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 MIS12Q9H081 205 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 BATF3Q9NR55 127 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 PLLPQ9Y342 182 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 CCDC195A0A1B0GUA6 201 aa20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 EIF4E1BA6NMX2 242 aaKnown RBP20.98■□□□□ 0.95
SHKBP1-225ENST00000600733 CYB561D2O14569 222 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms