RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 GPD1P21695 349 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 PROZP22891 400 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 AMPD1P23109 780 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 ATP5OP48047 213 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 BACE1P56817 501 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 SP2Q02086 613 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 DSG1Q02413 1049 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 HNRNPDQ14103 355 aaKnown RBP13.75□□□□□ -0.21
VRK3-209ENST00000594948 CHI3L2Q15782 390 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 STXBP2Q15833 593 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 FAM160B1Q5W0V3 765 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 SCARA5Q6ZMJ2 495 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 RIPOR1Q6ZS17 1223 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 ARID3BQ8IVW6 561 aaPredicted RBP13.75□□□□□ -0.21
VRK3-209ENST00000594948 MAP7D3Q8IWC1 876 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 ZBTB8OSQ8IWT0 167 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 CTAGE3PQ8IX95 158 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 KBTBD2Q8IY47 623 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 EXOC8Q8IYI6 725 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 EMC1Q8N766 993 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 DNERQ8NFT8 737 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 ZBTB10Q96DT7 871 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 CFAP36Q96G28 342 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 ACAP3Q96P50 834 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 PANX3Q96QZ0 392 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 TCHPQ9BT92 498 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 ASCC2Q9H1I8 757 aaPredicted RBP13.75□□□□□ -0.21
VRK3-209ENST00000594948 FAM96AQ9H5X1 160 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 RAB6BQ9NRW1 208 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 ZDHHC7Q9NXF8 308 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 NDE1Q9NXR1 346 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 WASF2Q9Y6W5 498 aa13.75□□□□□ -0.21
VRK3-209ENST00000594948 C2orf71A6NGG8 1288 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 IL18RAPO95256 599 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 PRKCBP05771 671 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 TPSB2P20231 275 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 MAGEA3P43357 314 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 CDH6P55285 790 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 RPL26P61254 145 aaKnown RBP13.74□□□□□ -0.21
VRK3-209ENST00000594948 XIAPP98170 497 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 TPSAB1Q15661 275 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 ZNF667Q5HYK9 610 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 CYP4V2Q6ZWL3 525 aaPredicted RBP13.74□□□□□ -0.21
VRK3-209ENST00000594948 ZBTB33Q86T24 672 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 CAND1Q86VP6 1230 aaKnown RBP13.74□□□□□ -0.21
VRK3-209ENST00000594948 TAB3Q8N5C8 712 aaPredicted RBP13.74□□□□□ -0.21
VRK3-209ENST00000594948 ZNF526Q8TF50 670 aaPredicted RBP13.74□□□□□ -0.21
VRK3-209ENST00000594948 PPP2R3CQ969Q6 453 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 FAM167AQ96KS9 214 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 FGD4Q96M96 766 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 PEBP4Q96S96 227 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 ECSITQ9BQ95 431 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 ADPGKQ9BRR6 497 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 TEX13BQ9BXU2 312 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 GCOM2Q9BZD3 368 aaPredicted RBP13.74□□□□□ -0.21
VRK3-209ENST00000594948 CYP3A43Q9HB55 503 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 ETNK2Q9NVF9 386 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 THAP1Q9NVV9 213 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 CPSF2Q9P2I0 782 aaKnown RBP13.74□□□□□ -0.21
VRK3-209ENST00000594948 KAT6AQ92794 2004 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 SDR42E2A6NKP2 422 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 DPYSL4O14531 572 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 ITGBL1O95965 494 aaPredicted RBP13.74□□□□□ -0.21
VRK3-209ENST00000594948 HMGCRP04035 888 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 PIM1P11309 404 aaPredicted RBP13.74□□□□□ -0.21
VRK3-209ENST00000594948 AQP5P55064 265 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 TFAMQ00059 246 aaKnown RBP13.74□□□□□ -0.21
VRK3-209ENST00000594948 PTPN11Q06124 597 aaPredicted RBP13.74□□□□□ -0.21
VRK3-209ENST00000594948 STX3Q13277 289 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 MXD4Q14582 209 aaPredicted RBP13.74□□□□□ -0.21
VRK3-209ENST00000594948 TAF5Q15542 800 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 RNF220Q5VTB9 566 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 MPZL3Q6UWV2 235 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 NPNTQ6UXI9 565 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 TSHZ1Q6ZSZ6 1077 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 GSDMBQ8TAX9 411 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.74□□□□□ -0.21
VRK3-209ENST00000594948 ACMSDQ8TDX5 336 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 VRTNQ9H8Y1 702 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 QTRT2Q9H974 415 aaKnown RBP13.74□□□□□ -0.21
VRK3-209ENST00000594948 PLAC1Q9HBJ0 212 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 MYOZ2Q9NPC6 264 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.74□□□□□ -0.21
VRK3-209ENST00000594948 SLC7A8Q9UHI5 535 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 SOX13Q9UN79 622 aa13.74□□□□□ -0.21
VRK3-209ENST00000594948 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.74□□□□□ -0.21
VRK3-209ENST00000594948 SLC15A5A6NIM6 579 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 C2CD4BA6NLJ0 364 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 TTLL13PA6NNM8 815 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 CXorf49A8MYA2 514 aaPredicted RBP13.73□□□□□ -0.21
VRK3-209ENST00000594948 APOL1O14791 398 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 KCNN4O15554 427 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 MAP3K13O43283 966 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 MICAL2O94851 1124 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 KLHL2O95198 593 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 LYNP07948 512 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 VDRP11473 427 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 MYL4P12829 197 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 ATICP31939 592 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 GPD2P43304 727 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms