RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 NUDT8Q8WV74 236 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 ARHGAP45Q92619 1136 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 PRCCQ92733 491 aaPredicted RBP3.31□□□□□ -1.88
VRK3-204ENST00000593912 C18orf25Q96B23 403 aaPredicted RBP3.31□□□□□ -1.88
VRK3-204ENST00000593912 HVCN1Q96D96 273 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 RRP36Q96EU6 259 aaKnown RBP3.31□□□□□ -1.88
VRK3-204ENST00000593912 APOLD1Q96LR9 279 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 UROC1Q96N76 676 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 PDZD7Q9H5P4 517 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 SYNDIG1Q9H7V2 258 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 TMEM206Q9H813 350 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 EPB41L5Q9HCM4 733 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 PREBQ9HCU5 417 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 DLL4Q9NR61 685 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 AASDHPPTQ9NRN7 309 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 TBC1D22BQ9NU19 505 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 PLA2G2EQ9NZK7 142 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 GCNT4Q9P109 453 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 PISDQ9UG56 409 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 ZMYM5Q9UJ78 669 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 ADAM21Q9UKJ8 722 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 ACSL6Q9UKU0 697 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 NEU2Q9Y3R4 380 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 STON1Q9Y6Q2 735 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 KMT2CQ8NEZ4 4911 aaKnown RBP3.31□□□□□ -1.88
VRK3-204ENST00000593912 SVEP1Q4LDE5 3571 aa3.31□□□□□ -1.88
VRK3-204ENST00000593912 STK36Q9NRP7 1315 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 SMIM28A0A1B0GU29 152 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 CPED1A4D0V7 1026 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.3□□□□□ -1.88
VRK3-204ENST00000593912 ADAMTS3O15072 1205 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 KRT86O43790 486 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 SORBS2O94875 1100 aaKnown RBP3.3□□□□□ -1.88
VRK3-204ENST00000593912 ADH1CP00326 375 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 CALM1P0DP23 149 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 CALM2P0DP24 149 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 CALM3P0DP25 149 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 COX6B1P14854 86 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 BPIP17213 487 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 CD38P28907 300 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 PCSK6P29122 969 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 OAS2P29728 719 aaKnown RBP3.3□□□□□ -1.88
VRK3-204ENST00000593912 HSPA4P34932 840 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 GRM5P41594 1212 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 LEPRP48357 1165 aaKnown RBP3.3□□□□□ -1.88
VRK3-204ENST00000593912 RXRGP48443 463 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 BCAT1P54687 386 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 NXPH1P58417 271 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 RNASE9P60153 205 aaKnown RBP3.3□□□□□ -1.88
VRK3-204ENST00000593912 SLFN5Q08AF3 891 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 RAD51AP2Q09MP3 1159 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 KCNB1Q14721 858 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 EMC2Q15006 297 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 CDKN3Q16667 212 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 SLC39A12Q504Y0 691 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 PRR16Q569H4 304 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 CCDC178Q5BJE1 867 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 PERM1Q5SV97 790 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 TYW1BQ6NUM6 668 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 ZNF517Q6ZMY9 492 aaPredicted RBP3.3□□□□□ -1.88
VRK3-204ENST00000593912 RAB11FIP2Q7L804 512 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 EFL1Q7Z2Z2 1120 aaKnown RBP3.3□□□□□ -1.88
VRK3-204ENST00000593912 DTX1Q86Y01 620 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 KCTD17Q8N5Z5 321 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 CEP120Q8N960 986 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 APPL2Q8NEU8 664 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 OR10T2Q8NGX3 314 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 OR4C6Q8NH72 309 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 KCNV2Q8TDN2 545 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 LENG9Q96B70 501 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 ARSGQ96EG1 525 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 C19orf60Q96EN9 201 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 ZMAT2Q96NC0 199 aaKnown RBP3.3□□□□□ -1.88
VRK3-204ENST00000593912 RANBP9Q96S59 729 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 UBAC1Q9BSL1 405 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 FOXP3Q9BZS1 431 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 PCED1AQ9H1Q7 454 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 RNF41Q9H4P4 317 aaPredicted RBP3.3□□□□□ -1.88
VRK3-204ENST00000593912 DHX33Q9H6R0 707 aaKnown RBP3.3□□□□□ -1.88
VRK3-204ENST00000593912 CYLDQ9NQC7 956 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 DNAJC17Q9NVM6 304 aaKnown RBP3.3□□□□□ -1.88
VRK3-204ENST00000593912 SMPD4Q9NXE4 827 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 DEC1Q9P2X7 70 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 SEC63Q9UGP8 760 aaKnown RBP3.3□□□□□ -1.88
VRK3-204ENST00000593912 PCDHB8Q9UN66 801 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 ARHGAP26Q9UNA1 814 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 PCDHB6Q9Y5E3 794 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 PCDHB11Q9Y5F2 797 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 CITO14578 2027 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 ABCA4P78363 2273 aa3.3□□□□□ -1.88
VRK3-204ENST00000593912 CNTNAP5Q8WYK1 1306 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.29□□□□□ -1.88
VRK3-204ENST00000593912 A0A0D9SFI3 127 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 A0A1W2PPC4 97 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 FAM221AA4D161 298 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 OR6C75A6NL08 312 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 C9orf172C9J069 976 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 TLR4O00206 839 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 ZBTB39O15060 712 aa3.29□□□□□ -1.88
VRK3-204ENST00000593912 NVLO15381 856 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms