RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 BYSLQ13895 437 aaKnown RBP25.27■■□□□ 1.64
LSM4-202ENST00000593564 ANO4Q32M45 955 aa25.27■■□□□ 1.64
LSM4-202ENST00000593564 MAP7D1Q3KQU3 841 aa25.27■■□□□ 1.64
LSM4-202ENST00000593564 NUDT18Q6ZVK8 323 aa25.27■■□□□ 1.64
LSM4-202ENST00000593564 HTR3DQ70Z44 454 aa25.27■■□□□ 1.64
LSM4-202ENST00000593564 HMGB4Q8WW32 186 aa25.27■■□□□ 1.64
LSM4-202ENST00000593564 PIGKQ92643 395 aa25.27■■□□□ 1.64
LSM4-202ENST00000593564 HNRNPABQ99729 332 aaKnown RBP25.27■■□□□ 1.64
LSM4-202ENST00000593564 TMEM9BQ9NQ34 198 aa25.27■■□□□ 1.64
LSM4-202ENST00000593564 CYLDQ9NQC7 956 aa25.27■■□□□ 1.64
LSM4-202ENST00000593564 EVLQ9UI08 416 aaPredicted RBP25.27■■□□□ 1.64
LSM4-202ENST00000593564 SCML2Q9UQR0 700 aa25.27■■□□□ 1.64
LSM4-202ENST00000593564 KIF20AO95235 890 aa25.26■■□□□ 1.63
LSM4-202ENST00000593564 VAMP7P51809 220 aa25.26■■□□□ 1.63
LSM4-202ENST00000593564 SPDYCQ5MJ68 293 aa25.26■■□□□ 1.63
LSM4-202ENST00000593564 CLEC20AQ6ZU45 233 aa25.26■■□□□ 1.63
LSM4-202ENST00000593564 GPRIN1Q7Z2K8 1008 aa25.26■■□□□ 1.63
LSM4-202ENST00000593564 ZNF513Q8N8E2 541 aaPredicted RBP25.26■■□□□ 1.63
LSM4-202ENST00000593564 KLF16Q9BXK1 252 aaPredicted RBP25.26■■□□□ 1.63
LSM4-202ENST00000593564 MBD1Q9UIS9 605 aaPredicted RBP25.26■■□□□ 1.63
LSM4-202ENST00000593564 CIZ1Q9ULV3 898 aaPredicted RBP25.26■■□□□ 1.63
LSM4-202ENST00000593564 STARD13Q9Y3M8 1113 aa25.26■■□□□ 1.63
LSM4-202ENST00000593564 MYO18AQ92614 2054 aaKnown RBP25.25■■□□□ 1.63
LSM4-202ENST00000593564 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 HHLA1C9JL84 531 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 CDX4O14627 284 aaPredicted RBP25.25■■□□□ 1.63
LSM4-202ENST00000593564 MAP3K13O43283 966 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 TBX18O95935 607 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 ADORA2BP29275 332 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 NOVA1P51513 510 aaKnown RBP25.25■■□□□ 1.63
LSM4-202ENST00000593564 IRX4P78413 519 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 GOLGA8FQ08AF8 430 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 GOLGA8DPQ0D2H9 430 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 NFIL3Q16649 462 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 C10orf76Q5T2E6 689 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 TMEFF1Q8IYR6 380 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 TWNKQ96RR1 684 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 IMPG2Q9BZV3 1241 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 CYP3A43Q9HB55 503 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 PNPLA8Q9NP80 782 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 PCDHA5Q9Y5H7 936 aa25.25■■□□□ 1.63
LSM4-202ENST00000593564 ATP5C1P36542 298 aaKnown RBP25.24■■□□□ 1.63
LSM4-202ENST00000593564 GRAMD4Q6IC98 578 aa25.24■■□□□ 1.63
LSM4-202ENST00000593564 KLHDC10Q6PID8 442 aa25.24■■□□□ 1.63
LSM4-202ENST00000593564 INTS8Q75QN2 995 aaKnown RBP25.24■■□□□ 1.63
LSM4-202ENST00000593564 PGBD3Q8N328 593 aa25.24■■□□□ 1.63
LSM4-202ENST00000593564 FRMD1Q8N878 549 aa25.24■■□□□ 1.63
LSM4-202ENST00000593564 CYFIP2Q96F07 1278 aa25.24■■□□□ 1.63
LSM4-202ENST00000593564 NT5C1AQ9BXI3 368 aa25.24■■□□□ 1.63
LSM4-202ENST00000593564 APOBEC3GQ9HC16 384 aaKnown RBP25.24■■□□□ 1.63
LSM4-202ENST00000593564 OSER1Q9NX31 292 aa25.24■■□□□ 1.63
LSM4-202ENST00000593564 MARK1Q9P0L2 795 aa25.24■■□□□ 1.63
LSM4-202ENST00000593564 LSM7Q9UK45 103 aaKnown RBP25.24■■□□□ 1.63
LSM4-202ENST00000593564 HCN2Q9UL51 889 aa25.24■■□□□ 1.63
LSM4-202ENST00000593564 TRIM24O15164 1050 aa25.23■■□□□ 1.63
LSM4-202ENST00000593564 CYP26A1O43174 497 aa25.23■■□□□ 1.63
LSM4-202ENST00000593564 CACNG3O60359 315 aa25.23■■□□□ 1.63
LSM4-202ENST00000593564 RHOBTB3O94955 611 aa25.23■■□□□ 1.63
LSM4-202ENST00000593564 NR2F2P24468 414 aa25.23■■□□□ 1.63
LSM4-202ENST00000593564 DPP6P42658 865 aa25.23■■□□□ 1.63
LSM4-202ENST00000593564 PTGER3P43115 390 aa25.23■■□□□ 1.63
LSM4-202ENST00000593564 ENPEPQ07075 957 aa25.23■■□□□ 1.63
LSM4-202ENST00000593564 TRIM61Q5EBN2 209 aa25.23■■□□□ 1.63
LSM4-202ENST00000593564 SYT12Q8IV01 421 aa25.23■■□□□ 1.63
LSM4-202ENST00000593564 XPO6Q96QU8 1125 aaKnown RBP25.23■■□□□ 1.63
LSM4-202ENST00000593564 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.23■■□□□ 1.63
LSM4-202ENST00000593564 DNAJC17Q9NVM6 304 aaKnown RBP25.23■■□□□ 1.63
LSM4-202ENST00000593564 WDR35Q9P2L0 1181 aa25.23■■□□□ 1.63
LSM4-202ENST00000593564 PLXND1Q9Y4D7 1925 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 FAM237AA0A1B0GTK4 181 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 GIPC1O14908 333 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 CSRP1P21291 193 aaKnown RBP25.22■■□□□ 1.63
LSM4-202ENST00000593564 ACO1P21399 889 aaKnown RBP25.22■■□□□ 1.63
LSM4-202ENST00000593564 NTSR1P30989 418 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 SYKP43405 635 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 LMAN2Q12907 356 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 SH3PXD2AQ5TCZ1 1133 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 LYSMD4Q5XG99 296 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 ARMCX6Q7L4S7 300 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 MIB1Q86YT6 1006 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 SPRYD3Q8NCJ5 442 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 TAS1R2Q8TE23 839 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 CCDC47Q96A33 483 aaKnown RBP25.22■■□□□ 1.63
LSM4-202ENST00000593564 JAKMIP2Q96AA8 810 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 SPATA32Q96LK8 384 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 BBS2Q9BXC9 721 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 NIF3L1Q9GZT8 377 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 NMUR1Q9HB89 426 aa25.22■■□□□ 1.63
LSM4-202ENST00000593564 GON4LQ3T8J9 2241 aa25.21■■□□□ 1.63
LSM4-202ENST00000593564 NEDD8-MDP1E9PL57 170 aa25.21■■□□□ 1.63
LSM4-202ENST00000593564 CILPO75339 1184 aa25.21■■□□□ 1.63
LSM4-202ENST00000593564 PRR29P0C7W0 189 aa25.21■■□□□ 1.63
LSM4-202ENST00000593564 TRIM49P0CI25 452 aa25.21■■□□□ 1.63
LSM4-202ENST00000593564 TRIM49CP0CI26 452 aa25.21■■□□□ 1.63
LSM4-202ENST00000593564 HOXB2P14652 356 aa25.21■■□□□ 1.63
LSM4-202ENST00000593564 TYRP14679 529 aa25.21■■□□□ 1.63
LSM4-202ENST00000593564 GABRG2P18507 467 aa25.21■■□□□ 1.63
LSM4-202ENST00000593564 HOXD12P35452 270 aa25.21■■□□□ 1.63
LSM4-202ENST00000593564 GCLMP48507 274 aa25.21■■□□□ 1.63
LSM4-202ENST00000593564 PPP3CAQ08209 521 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms