RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SMRP1Q8NCR6 262 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 MNS1Q8NEH6 495 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 SPPL2BQ8TCT7 592 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 ACTRT1Q8TDG2 376 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 RIN2Q8WYP3 895 aaPredicted RBP14.1□□□□□ -0.15
VMP1-217ENST00000593168 KRT35Q92764 455 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 PIWIL1Q96J94 861 aaKnown RBP14.1□□□□□ -0.15
VMP1-217ENST00000593168 RPGRIP1Q96KN7 1286 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 C8orf48Q96LL4 319 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 PSMB7Q99436 277 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 NCAPGQ9BPX3 1015 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 CNPY3Q9BT09 278 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 RHOBTB2Q9BYZ6 727 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 TTC7AQ9ULT0 858 aaPredicted RBP14.1□□□□□ -0.15
VMP1-217ENST00000593168 USP3Q9Y6I4 520 aa14.1□□□□□ -0.15
VMP1-217ENST00000593168 F8VP50 259 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 TRIM66O15016 1216 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 PSTPIP1O43586 416 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 HSF2BPO75031 334 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 CPB1P15086 417 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 PDGFRAP16234 1089 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 CYP2F1P24903 491 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 FLT3P36888 993 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 GRIK1P39086 918 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 DNA2P51530 1060 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 DAOAP59103 153 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 RNASE9P60153 205 aaKnown RBP14.09□□□□□ -0.15
VMP1-217ENST00000593168 KRT17Q04695 432 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 CBX2Q14781 532 aaPredicted RBP14.09□□□□□ -0.15
VMP1-217ENST00000593168 TAF5Q15542 800 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 PM20D1Q6GTS8 502 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 PRSS55Q6UWB4 352 aaPredicted RBP14.09□□□□□ -0.15
VMP1-217ENST00000593168 RSPO2Q6UXX9 243 aaPredicted RBP14.09□□□□□ -0.15
VMP1-217ENST00000593168 ZNF572Q7Z3I7 529 aaPredicted RBP14.09□□□□□ -0.15
VMP1-217ENST00000593168 RBM23Q86U06 439 aaKnown RBP14.09□□□□□ -0.15
VMP1-217ENST00000593168 CLEC4CQ8WTT0 213 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 POF1BQ8WVV4 589 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 IRGQQ8WZA9 623 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 ALG3Q92685 438 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 CAPZA3Q96KX2 299 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 DDX23Q9BUQ8 820 aaKnown RBP14.09□□□□□ -0.15
VMP1-217ENST00000593168 ULBP1Q9BZM6 244 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 ABI2Q9NYB9 513 aaPredicted RBP14.09□□□□□ -0.15
VMP1-217ENST00000593168 USTQ9Y2C2 406 aa14.09□□□□□ -0.15
VMP1-217ENST00000593168 CTAGE15A4D2H0 777 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 MTMR11A4FU01 709 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 PDE2AO00408 941 aaPredicted RBP14.08□□□□□ -0.16
VMP1-217ENST00000593168 TNFRSF10BO14763 440 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 CEP104O60308 925 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 GRAP2O75791 330 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 RNF8O76064 485 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 ZBED1O96006 694 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 CTAGE8P0CG41 777 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 DESP17661 470 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 SDC4P31431 198 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 PCK1P35558 622 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 PTPN9P43378 593 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 TAS2R40P59535 323 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 YWHAZP63104 245 aaKnown RBP14.08□□□□□ -0.16
VMP1-217ENST00000593168 TUBB4BP68371 445 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 ITIH3Q06033 890 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 CCDC14Q49A88 953 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 CCDC181Q5TID7 509 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 TRNP1Q6NT89 227 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 GPRIN1Q7Z2K8 1008 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 CTAGE6Q86UF2 777 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 CTAGE4Q8IX94 777 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 FBXL6Q8N531 539 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 ATAD1Q8NBU5 361 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 PPP2R3CQ969Q6 453 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 CEP295NLQ96MC4 621 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.08□□□□□ -0.16
VMP1-217ENST00000593168 SSX2IPQ9Y2D8 614 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 USP15Q9Y4E8 981 aaPredicted RBP14.08□□□□□ -0.16
VMP1-217ENST00000593168 CDY1Q9Y6F8 540 aa14.08□□□□□ -0.16
VMP1-217ENST00000593168 EFCAB8A8MWE9 144 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 LRCH4O75427 683 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 DAB1O75553 588 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 FGF18O76093 207 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 URODP06132 367 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 KRT7P08729 469 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 HAPLN1P10915 354 aaPredicted RBP14.07□□□□□ -0.16
VMP1-217ENST00000593168 OR1D2P34982 312 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 NOS2P35228 1153 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 MATKP42679 507 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 MARCKSL1P49006 195 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 CDR1P51861 262 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 ARPP19P56211 112 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 RBM10P98175 930 aaKnown RBP14.07□□□□□ -0.16
VMP1-217ENST00000593168 ROR1Q01973 937 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 CREMQ03060 361 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 HADHQ16836 314 aaKnown RBP14.07□□□□□ -0.16
VMP1-217ENST00000593168 DCAF12L1Q5VU92 463 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 TPGS2Q68CL5 300 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 RNF19BQ6ZMZ0 732 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 BEND5Q7L4P6 421 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 POLNQ7Z5Q5 900 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 SCN4BQ8IWT1 228 aa14.07□□□□□ -0.16
VMP1-217ENST00000593168 SUGP1Q8IWZ8 645 aaKnown RBP14.07□□□□□ -0.16
VMP1-217ENST00000593168 KATNAL2Q8IYT4 538 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms