RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, human

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-218	ENST00000593053	PPP1R3G	B7ZBB8	358 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	HOXC11	O43248	304 aa	Predicted RBP	13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	GREM1	O60565	184 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	LRP3	O75074	770 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	BMP6	P22004	513 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	PPP1R2	P41236	205 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	GRIA2	P42262	883 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	DGKE	P52429	567 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	MRPS21	P82921	87 aa	Known RBP	13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	ARHGAP8	P85298	464 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	FOXK2	Q01167	660 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	GOLGA8F	Q08AF8	430 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	GOLGA8DP	Q0D2H9	430 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	GOLGA7B	Q2TAP0	167 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	ANO4	Q32M45	955 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	CCDC40	Q4G0X9	1142 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	EMC10	Q5UCC4	262 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	TTI2	Q6NXR4	508 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	DGLUCY	Q7Z3D6	616 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	CCDC186	Q7Z3E2	898 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	KBTBD6	Q86V97	674 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	ETFBKMT	Q8IXQ9	262 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	NELFB	Q8WX92	580 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	CEP63	Q96MT8	703 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	DNMT3L	Q9UJW3	386 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	LSM7	Q9UK45	103 aa	Known RBP	13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	MMP17	Q9ULZ9	603 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	USP3	Q9Y6I4	520 aa		13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	HELZ	P42694	1942 aa	Known RBP	13.78	□□□□□ -0.2
PRKCSH-218	ENST00000593053	TULP3	O75386	442 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	KLF8	O95600	359 aa	Predicted RBP	13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	RALA	P11233	206 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TIE1	P35590	1138 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	ANP32A	P39687	249 aa	Known RBP	13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	FMO5	P49326	533 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	PSEN1	P49768	467 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	SLC8A3	P57103	927 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	YWHAE	P62258	255 aa	Known RBP	13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	MORC3	Q14149	939 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	CRY1	Q16526	586 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	CSRP2	Q16527	193 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	ANO7	Q6IWH7	933 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	KLHDC10	Q6PID8	442 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TADA2B	Q86TJ2	420 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	PIGZ	Q86VD9	579 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TTC30A	Q86WT1	665 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	MIB1	Q86YT6	1006 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	PHTF2	Q8N3S3	785 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	ALLC	Q8N6M5	410 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	IL17RC	Q8NAC3	791 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	ANKRD52	Q8NB46	1076 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	UBXN6	Q9BZV1	441 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	ZDHHC4	Q9NPG8	344 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	DEC1	Q9P2X7	70 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	EBF1	Q9UH73	591 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	CDV3	Q9UKY7	258 aa	Known RBP	13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053	CTNND2	Q9UQB3	1225 aa		13.77	□□□□□ -0.21
PRKCSH-218	ENST00000593053		A0A0A0MRY4	1105 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	BICDL2	A1A5D9	508 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TBC1D3B	A6NDS4	549 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	NEDD8-MDP1	E9PL57	170 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	SGK1	O00141	431 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TULP2	O00295	520 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	DCLK1	O15075	740 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TRIM24	O15164	1050 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	CHRM1	P11229	460 aa	Predicted RBP	13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	CD19	P15391	556 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TBXAS1	P24557	533 aa	Predicted RBP	13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TNFRSF4	P43489	277 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	KIR2DL1	P43626	348 aa	Predicted RBP	13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	PLA2G4A	P47712	749 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	PDE4C	Q08493	712 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	CCDC6	Q16204	474 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	SGO2	Q562F6	1265 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TPGS1	Q6ZTW0	290 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TXNDC5	Q8NBS9	432 aa	Known RBP	13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	LOXL4	Q96JB6	756 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	BBS2	Q9BXC9	721 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TPSD1	Q9BZJ3	242 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	ARRDC1-AS1	Q9H2J1	176 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	CLIC5	Q9NZA1	410 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	HESX1	Q9UBX0	185 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	RASAL2	Q9UJF2	1139 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TSPAN16	Q9UKR8	245 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	INVS	Q9Y283	1065 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	CEP250	Q9BV73	2442 aa		13.76	□□□□□ -0.21
PRKCSH-218	ENST00000593053	STC2	O76061	302 aa		13.75	□□□□□ -0.21
PRKCSH-218	ENST00000593053	EPN2	O95208	641 aa		13.75	□□□□□ -0.21
PRKCSH-218	ENST00000593053	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
PRKCSH-218	ENST00000593053	SDHB	P21912	280 aa		13.75	□□□□□ -0.21
PRKCSH-218	ENST00000593053	TKTL1	P51854	596 aa		13.75	□□□□□ -0.21
PRKCSH-218	ENST00000593053	ATXN1	P54253	815 aa	Known RBP	13.75	□□□□□ -0.21
PRKCSH-218	ENST00000593053	BCAT1	P54687	386 aa		13.75	□□□□□ -0.21
PRKCSH-218	ENST00000593053	STX17	P56962	302 aa		13.75	□□□□□ -0.21
PRKCSH-218	ENST00000593053	YWHAG	P61981	247 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
PRKCSH-218	ENST00000593053	EFEMP1	Q12805	493 aa		13.75	□□□□□ -0.21
PRKCSH-218	ENST00000593053	PLK5	Q496M5	336 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms