RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 TUBB8Q3ZCM7 444 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 ZC2HC1CQ53FD0 456 aaPredicted RBP11.82□□□□□ -0.52
SEH1L-208ENST00000590843 SLC36A4Q6YBV0 504 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 TBC1D1Q86TI0 1168 aaPredicted RBP11.82□□□□□ -0.52
SEH1L-208ENST00000590843 ADGRA3Q8IWK6 1321 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 CFAP61Q8NHU2 1237 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 USP33Q8TEY7 942 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 TMEM159Q96B96 161 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 RILPQ96NA2 401 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 TBC1D13Q9NVG8 400 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 CCDC189A1A4V9 331 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 SPATA31D3P0C874 917 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 TNNI3P19429 210 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 OXTRP30559 389 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 ATP6V1E1P36543 226 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 GUCA1AP43080 201 aaPredicted RBP11.82□□□□□ -0.52
SEH1L-208ENST00000590843 KDSRQ06136 332 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 INSCQ1MX18 579 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 ZBTB41Q5SVQ8 909 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 MAP3K21Q5TCX8 1036 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 SPATA31D4Q6ZUB0 917 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 RTL10Q7L3V2 364 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 ANKS1BQ7Z6G8 1248 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 LRRC49Q8IUZ0 686 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 SDCCAG3Q96C92 435 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 CFAP36Q96G28 342 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 HSFY1Q96LI6 401 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 SHPRHQ149N8 1683 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 FPGTO14772 594 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 ANXA5P08758 320 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 EMC10Q5UCC4 262 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 ANKRD20A3Q5VUR7 823 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 ANGPTL8Q6UXH0 198 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 FAM47EQ6ZV65 393 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 EFCAB3Q8N7B9 438 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 ZSCAN18Q8TBC5 510 aaPredicted RBP11.82□□□□□ -0.52
SEH1L-208ENST00000590843 CCDC195A0A1B0GUA6 201 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 NEDD8-MDP1E9PL57 170 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 HGSO14964 777 aaPredicted RBP11.82□□□□□ -0.52
SEH1L-208ENST00000590843 TBL1XO60907 577 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 IQCF3P0C7M6 154 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 ACAT1P24752 427 aaKnown RBP11.82□□□□□ -0.52
SEH1L-208ENST00000590843 CHRNA3P32297 505 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 HNF1BP35680 557 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 DGKGP49619 791 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 SPDYE7PQ495Y7 208 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 FAM124AQ86V42 546 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 EXT2Q93063 718 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 ZDHHC6Q9H6R6 413 aa11.82□□□□□ -0.52
SEH1L-208ENST00000590843 MAP2P11137 1827 aaKnown RBP11.81□□□□□ -0.52
SEH1L-208ENST00000590843 TMX2-CTNND1H3BSU7 103 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 SLC37A4O43826 429 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 MED24O75448 989 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 ANTXR2P58335 489 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 POU5F1BQ06416 359 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 DUSP4Q13115 394 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 MARC1Q5VT66 337 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 PTCRAQ6ISU1 281 aaPredicted RBP11.81□□□□□ -0.52
SEH1L-208ENST00000590843 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.81□□□□□ -0.52
SEH1L-208ENST00000590843 GRAMD1CQ8IYS0 662 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 APPL1Q9UKG1 709 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 FHOD1Q9Y613 1164 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 TLR5O60602 858 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 EIF4A3P38919 411 aaKnown RBP11.81□□□□□ -0.52
SEH1L-208ENST00000590843 SLMAPQ14BN4 828 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 GRIK5Q16478 980 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 NLRP9Q7RTR0 991 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 CACUL1Q86Y37 369 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 XPO4Q9C0E2 1151 aaKnown RBP11.81□□□□□ -0.52
SEH1L-208ENST00000590843 TXLNGQ9NUQ3 528 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 C6orf203Q9P0P8 240 aaPredicted RBP11.81□□□□□ -0.52
SEH1L-208ENST00000590843 CDV3Q9UKY7 258 aaKnown RBP11.81□□□□□ -0.52
SEH1L-208ENST00000590843 LMO7Q8WWI1 1683 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 URADA6NGE7 173 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 RNASEH2AO75792 299 aaKnown RBP11.81□□□□□ -0.52
SEH1L-208ENST00000590843 LYPLA2O95372 231 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 GPR1P46091 355 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 ZNF75DP51815 510 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 MMEL1Q495T6 779 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 C16orf59Q7L2K0 433 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 MAP4K3Q8IVH8 894 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 ING5Q8WYH8 240 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 MYLPFQ96A32 169 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 MSANTD3Q96H12 275 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 POPDC2Q9HBU9 364 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 CASS4Q9NQ75 786 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 AK5Q9Y6K8 562 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 OR56A5P0C7T3 313 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 CLK3P49761 638 aaKnown RBP11.81□□□□□ -0.52
SEH1L-208ENST00000590843 SLC12A1Q13621 1099 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 HSDL1Q3SXM5 330 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 ZDHHC20Q5W0Z9 365 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 ZNF720Q7Z2F6 126 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 ACRBPQ8NEB7 543 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 FUBP3Q96I24 572 aaKnown RBP eCLIP11.81□□□□□ -0.521e-6■□□□□ 10.7
SEH1L-208ENST00000590843 FRMD8P1Q9BZ68 369 aaPredicted RBP11.81□□□□□ -0.52
SEH1L-208ENST00000590843 ARHGEF38Q9NXL2 777 aa11.81□□□□□ -0.52
SEH1L-208ENST00000590843 PTPRJQ12913 1337 aa11.8□□□□□ -0.52
SEH1L-208ENST00000590843 SOD2P04179 222 aa11.8□□□□□ -0.52
SEH1L-208ENST00000590843 PRCPP42785 496 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms