RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 PMF1Q6P1K2 205 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 TSSK4Q6SA08 328 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 SASS6Q6UVJ0 657 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 ENOSF1Q7L5Y1 443 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 BBS7Q8IWZ6 715 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 EZH1Q92800 747 aaPredicted RBP23.49■■□□□ 1.35
MBD3-208ENST00000590830 C2orf42Q9NWW7 574 aa23.49■■□□□ 1.35
MBD3-208ENST00000590830 SLC9A3R1O14745 358 aaPredicted RBP23.48■■□□□ 1.35
MBD3-208ENST00000590830 EGFP01133 1207 aa23.48■■□□□ 1.35
MBD3-208ENST00000590830 RGS7P49802 495 aa23.48■■□□□ 1.35
MBD3-208ENST00000590830 CSTF1Q05048 431 aaKnown RBP23.48■■□□□ 1.35
MBD3-208ENST00000590830 ADIGQ0VDE8 80 aa23.48■■□□□ 1.35
MBD3-208ENST00000590830 LRRC32Q14392 662 aa23.48■■□□□ 1.35
MBD3-208ENST00000590830 CDKAL1Q5VV42 579 aa23.48■■□□□ 1.35
MBD3-208ENST00000590830 HTR3DQ70Z44 454 aa23.48■■□□□ 1.35
MBD3-208ENST00000590830 ALYREFQ86V81 257 aaKnown RBP23.48■■□□□ 1.35
MBD3-208ENST00000590830 P2RY13Q9BPV8 354 aa23.48■■□□□ 1.35
MBD3-208ENST00000590830 LRRC4Q9HBW1 653 aa23.48■■□□□ 1.35
MBD3-208ENST00000590830 PRMT8Q9NR22 394 aaPredicted RBP23.48■■□□□ 1.35
MBD3-208ENST00000590830 DNMT3LQ9UJW3 386 aa23.48■■□□□ 1.35
MBD3-208ENST00000590830 FBXO4Q9UKT5 387 aa23.48■■□□□ 1.35
MBD3-208ENST00000590830 SH3BP1Q9Y3L3 701 aa23.48■■□□□ 1.35
MBD3-208ENST00000590830 PROB1E7EW31 1015 aa23.47■■□□□ 1.35
MBD3-208ENST00000590830 M0QYV0 167 aa23.47■■□□□ 1.35
MBD3-208ENST00000590830 PIK3R2O00459 728 aa23.47■■□□□ 1.35
MBD3-208ENST00000590830 HOXD11P31277 338 aaPredicted RBP23.47■■□□□ 1.35
MBD3-208ENST00000590830 OPRD1P41143 372 aa23.47■■□□□ 1.35
MBD3-208ENST00000590830 YWHAGP61981 247 aaKnown RBP eCLIP23.47■■□□□ 1.35
MBD3-208ENST00000590830 AMPD2Q01433 879 aa23.47■■□□□ 1.35
MBD3-208ENST00000590830 GRSF1Q12849 480 aaKnown RBP eCLIP23.47■■□□□ 1.35
MBD3-208ENST00000590830 NR1H3Q13133 447 aa23.47■■□□□ 1.35
MBD3-208ENST00000590830 STILQ15468 1287 aa23.47■■□□□ 1.35
MBD3-208ENST00000590830 DENND1BQ6P3S1 775 aa23.47■■□□□ 1.35
MBD3-208ENST00000590830 PKN3Q6P5Z2 889 aa23.47■■□□□ 1.35
MBD3-208ENST00000590830 SHC3Q92529 594 aa23.47■■□□□ 1.35
MBD3-208ENST00000590830 ANO10Q9NW15 660 aa23.47■■□□□ 1.35
MBD3-208ENST00000590830 FANCLQ9NW38 375 aa23.47■■□□□ 1.35
MBD3-208ENST00000590830 TBC1D14Q9P2M4 693 aa23.47■■□□□ 1.35
MBD3-208ENST00000590830 R4GN57 208 aa23.47■■□□□ 1.35
MBD3-208ENST00000590830 YJEFN3A6XGL0 299 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 E7ENQ6 273 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 RALAP11233 206 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 TDGF1P13385 188 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 LCP1P13796 627 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 EEF1GP26641 437 aaKnown RBP23.46■■□□□ 1.35
MBD3-208ENST00000590830 HOXC13P31276 330 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 GPD2P43304 727 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 SLC6A11P48066 632 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 MRE11P49959 708 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 SATB1Q01826 763 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 ARHGAP18Q8N392 663 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 SYNPOQ8N3V7 929 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 ZNF606Q8WXB4 792 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 CD101Q93033 1021 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 IER2Q9BTL4 223 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 TAB2Q9NYJ8 693 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 DNAJC12Q9UKB3 198 aa23.46■■□□□ 1.35
MBD3-208ENST00000590830 LETM1O95202 739 aaPredicted RBP23.45■■□□□ 1.34
MBD3-208ENST00000590830 MESP2Q0VG99 397 aa23.45■■□□□ 1.34
MBD3-208ENST00000590830 STX1AQ16623 288 aa23.45■■□□□ 1.34
MBD3-208ENST00000590830 ZNF528Q3MIS6 628 aa23.45■■□□□ 1.34
MBD3-208ENST00000590830 LY6G5CQ5SRR4 150 aa23.45■■□□□ 1.34
MBD3-208ENST00000590830 TMEM25Q86YD3 366 aa23.45■■□□□ 1.34
MBD3-208ENST00000590830 MIB1Q86YT6 1006 aa23.45■■□□□ 1.34
MBD3-208ENST00000590830 SPEM1Q8N4L4 309 aa23.45■■□□□ 1.34
MBD3-208ENST00000590830 NELL1Q92832 810 aa23.45■■□□□ 1.34
MBD3-208ENST00000590830 FAM81BQ96LP2 452 aa23.45■■□□□ 1.34
MBD3-208ENST00000590830 VPS13AQ96RL7 3174 aa23.45■■□□□ 1.34
MBD3-208ENST00000590830 MYO16Q9Y6X6 1858 aa23.45■■□□□ 1.34
MBD3-208ENST00000590830 ANTXRLA6NF34 631 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 FOXN3O00409 490 aaPredicted RBP23.44■■□□□ 1.34
MBD3-208ENST00000590830 KLKB1P03952 638 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 DRD1P21728 446 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 USP8P40818 1118 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 RPL34P49207 117 aaKnown RBP23.44■■□□□ 1.34
MBD3-208ENST00000590830 DAOAP59103 153 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 EFEMP1Q12805 493 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 KRT31Q15323 416 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 BSPRYQ5W0U4 402 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 C12orf40Q86WS4 652 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 SIX6OS1Q8N1H7 587 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 SCML4Q8N228 414 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 CLEC4CQ8WTT0 213 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 OTUB2Q96DC9 234 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 HSFY1Q96LI6 401 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 CNGB3Q9NQW8 809 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 CYTH4Q9UIA0 394 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 RASAL2Q9UJF2 1139 aa23.44■■□□□ 1.34
MBD3-208ENST00000590830 USP34Q70CQ2 3546 aa23.43■■□□□ 1.34
MBD3-208ENST00000590830 STC2O76061 302 aa23.43■■□□□ 1.34
MBD3-208ENST00000590830 PNMA6AP0CW24 399 aaPredicted RBP23.43■■□□□ 1.34
MBD3-208ENST00000590830 GNA15P30679 374 aa23.43■■□□□ 1.34
MBD3-208ENST00000590830 CXCL12P48061 93 aa23.43■■□□□ 1.34
MBD3-208ENST00000590830 TYRO3Q06418 890 aa23.43■■□□□ 1.34
MBD3-208ENST00000590830 NCAPHQ15003 741 aa23.43■■□□□ 1.34
MBD3-208ENST00000590830 Q6ZNB5 142 aa23.43■■□□□ 1.34
MBD3-208ENST00000590830 TADA2BQ86TJ2 420 aa23.43■■□□□ 1.34
MBD3-208ENST00000590830 EDEM1Q92611 657 aa23.43■■□□□ 1.34
MBD3-208ENST00000590830 CDK5RAP1Q96SZ6 601 aaKnown RBP23.43■■□□□ 1.34
MBD3-208ENST00000590830 VPS16Q9H269 839 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms