RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 FILIP1LQ4L180 1135 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 C10orf120Q5SQS8 335 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 DENND1BQ6P3S1 775 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 RSRC2Q7L4I2 434 aaKnown RBP12.49□□□□□ -0.41
LIG3-213ENST00000590630 BHLHA9Q7RTU4 235 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 LUZP1Q86V48 1076 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 SLC47A2Q86VL8 602 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 RALGPS2Q86X27 583 aaPredicted RBP12.49□□□□□ -0.41
LIG3-213ENST00000590630 CPA6Q8N4T0 437 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 PJA1Q8NG27 643 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 NEK11Q8NG66 645 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 IRGQQ8WZA9 623 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 PCMTD1Q96MG8 357 aaPredicted RBP12.49□□□□□ -0.41
LIG3-213ENST00000590630 OSBPL6Q9BZF3 934 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 LHX5Q9H2C1 402 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 EBF3Q9H4W6 596 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 RTN4Q9NQC3 1192 aaKnown RBP12.49□□□□□ -0.41
LIG3-213ENST00000590630 HPS4Q9NQG7 708 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 CFAP97Q9P2B7 532 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 TBC1D14Q9P2M4 693 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 SIT1Q9Y3P8 196 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 CEP83Q9Y592 693 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 VPS13AQ96RL7 3174 aa12.49□□□□□ -0.41
LIG3-213ENST00000590630 CACNA1HO95180 2353 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 GOLGA6L19H0YKK7 550 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 EPHB6O15197 1021 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 SART1O43290 800 aaKnown RBP12.48□□□□□ -0.41
LIG3-213ENST00000590630 GABBR2O75899 941 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 NFATC1O95644 943 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 TBX18O95935 607 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 CYP11B1P15538 503 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 CTHP32929 405 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 NUBP1P53384 320 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 VCPP55072 806 aaKnown RBP12.48□□□□□ -0.41
LIG3-213ENST00000590630 JAM2P57087 298 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 DAOAP59103 153 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 AMPD2Q01433 879 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 EML3Q32P44 896 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 TRIM68Q6AZZ1 485 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 FAM3CQ92520 227 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 GOLGA1Q92805 767 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 OTUB2Q96DC9 234 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 NOX5Q96PH1 765 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 SPAG5Q96R06 1193 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 KLF16Q9BXK1 252 aaPredicted RBP12.48□□□□□ -0.41
LIG3-213ENST00000590630 SLC4A5Q9BY07 1137 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 FOXQ1Q9C009 403 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 LTB4R2Q9NPC1 389 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 ST7Q9NRC1 585 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 OLA1Q9NTK5 396 aaKnown RBP12.48□□□□□ -0.41
LIG3-213ENST00000590630 SH3BP1Q9Y3L3 701 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 HCN4Q9Y3Q4 1203 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 WNT6Q9Y6F9 365 aa12.48□□□□□ -0.41
LIG3-213ENST00000590630 A0A1B0GTH6 734 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 SHISA7A6NL88 538 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 YJEFN3A6XGL0 299 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 E7ENQ6 273 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 SPECC1L-ADORA2AF8WAN1 911 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 NCAM2O15394 837 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 SERPINC1P01008 464 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 ARSAP15289 507 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 CD72P21854 359 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 SOX5P35711 763 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 SNX16P57768 344 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 COG7P83436 770 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 NR1H3Q13133 447 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 PDCLQ13371 301 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 UBXN2BQ14CS0 331 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 BSPRYQ5W0U4 402 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 BTBD8Q5XKL5 378 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 TMEM110Q86TL2 294 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 TMEM105Q8N8V8 129 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 EPS8L1Q8TE68 723 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 RNF139Q8WU17 664 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 PRRX2Q99811 253 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 TRIM62Q9BVG3 475 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 KCNH6Q9H252 994 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 ECT2Q9H8V3 914 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 NLRC4Q9NPP4 1024 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 ABCC13Q9NSE7 274 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 MARCH2Q9P0N8 246 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 CYTH4Q9UIA0 394 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 NUDT5Q9UKK9 219 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 STRIP2Q9ULQ0 834 aa12.47□□□□□ -0.41
LIG3-213ENST00000590630 CACNA1IQ9P0X4 2223 aa12.46□□□□□ -0.41
LIG3-213ENST00000590630 A0A1W2PQC6 194 aa12.46□□□□□ -0.41
LIG3-213ENST00000590630 OTOL1A6NHN0 477 aaPredicted RBP12.46□□□□□ -0.41
LIG3-213ENST00000590630 FAM170BA6NMN3 283 aa12.46□□□□□ -0.41
LIG3-213ENST00000590630 E5RJQ4 531 aa12.46□□□□□ -0.41
LIG3-213ENST00000590630 PIK3R2O00459 728 aa12.46□□□□□ -0.41
LIG3-213ENST00000590630 TEX33O43247 280 aa12.46□□□□□ -0.41
LIG3-213ENST00000590630 PI15O43692 258 aa12.46□□□□□ -0.41
LIG3-213ENST00000590630 GFPT2O94808 682 aa12.46□□□□□ -0.41
LIG3-213ENST00000590630 LSM8O95777 96 aaKnown RBP12.46□□□□□ -0.41
LIG3-213ENST00000590630 LTFP02788 710 aa12.46□□□□□ -0.41
LIG3-213ENST00000590630 TARSP26639 723 aaKnown RBP12.46□□□□□ -0.41
LIG3-213ENST00000590630 STAT1P42224 750 aa12.46□□□□□ -0.41
LIG3-213ENST00000590630 MAGEA9P43362 315 aa12.46□□□□□ -0.41
LIG3-213ENST00000590630 SOX9P48436 509 aa12.46□□□□□ -0.41
LIG3-213ENST00000590630 EFEMP1Q12805 493 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms