RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 ADCY1Q08828 1119 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 CDO1Q16878 200 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 KCTD19Q17RG1 926 aaPredicted RBP10.66□□□□□ -0.7
APOC1-205ENST00000589781 AAK1Q2M2I8 961 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 SMTNL2Q2TAL5 461 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 ATP13A4Q4VNC1 1196 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 SH3PXD2AQ5TCZ1 1133 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 CCDC70Q6NSX1 233 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 FUT10Q6P4F1 479 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 EP400NLQ6ZTU2 488 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 SLC26A9Q7LBE3 791 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 ANKS1BQ7Z6G8 1248 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 LRRTM3Q86VH5 581 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 KATNAL2Q8IYT4 538 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 ZDHHC14Q8IZN3 488 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 THEM5Q8N1Q8 247 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 SMRP1Q8NCR6 262 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 SUSD6Q92537 303 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 RNF25Q96BH1 459 aaPredicted RBP10.66□□□□□ -0.7
APOC1-205ENST00000589781 SMARCD1Q96GM5 515 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 HSFY1Q96LI6 401 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 CFAP57Q96MR6 1250 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 SLITRK1Q96PX8 696 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 PEBP4Q96S96 227 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 ACBD6Q9BR61 282 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 CYLDQ9NQC7 956 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 DMGDHQ9UI17 866 aaKnown RBP10.66□□□□□ -0.7
APOC1-205ENST00000589781 ADAM28Q9UKQ2 775 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.66□□□□□ -0.7
APOC1-205ENST00000589781 IRAK3Q9Y616 596 aa10.66□□□□□ -0.7
APOC1-205ENST00000589781 ZNF638Q14966 1978 aaKnown RBP10.66□□□□□ -0.7
APOC1-205ENST00000589781 BDP1A6H8Y1 2624 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 GOLGA6L10A0A0M3HER8 536 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 TARSL2A2RTX5 802 aaKnown RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 ZSCAN5CA6NGD5 496 aaPredicted RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 HHLA1C9JL84 531 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 PHF2O75151 1096 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 TADA2AO75478 443 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 HEXIM1O94992 359 aaKnown RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 ALDH2P05091 517 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 CNPP09543 421 aaKnown RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 PDGFRAP16234 1089 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 EPCAMP16422 314 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 TFE3P19532 575 aaPredicted RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 BDNFP23560 247 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 IL1R2P27930 398 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 SCNN1AP37088 669 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 NDUFV1P49821 464 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 TKTL1P51854 596 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 ZNF143P52747 638 aaPredicted RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 SLC8A3P57103 927 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 SNX16P57768 344 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 ATP11AP98196 1134 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 KRT17Q04695 432 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 ZP2Q05996 745 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 SMC1AQ14683 1233 aaKnown RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 SIX1Q15475 284 aaPredicted RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 SMAD2Q15796 467 aaKnown RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 CCDC14Q49A88 953 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 SLC39A12Q504Y0 691 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 VARS2Q5ST30 1063 aaKnown RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 PDE12Q6L8Q7 609 aaKnown RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 FAM171BQ6P995 826 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 CYP4V2Q6ZWL3 525 aaPredicted RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 TMC7Q7Z402 723 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 ZDHHC17Q8IUH5 632 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 SCUBE3Q8IX30 993 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 SIX6OS1Q8N1H7 587 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 UBE2Q2Q8WVN8 375 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 FAM149B1Q96BN6 582 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 TMEM169Q96HH4 297 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 RBM41Q96IZ5 413 aaKnown RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 KLHL5Q96PQ7 755 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 NAP1L3Q99457 506 aaPredicted RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 HINFPQ9BQA5 517 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 TRIM51Q9BSJ1 452 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 CNPY3Q9BT09 278 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 APOL5Q9BWW9 433 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 ULBP1Q9BZM6 244 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 EPHX3Q9H6B9 360 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 LRRC4Q9HBW1 653 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 NGRNQ9NPE2 291 aaKnown RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 ENTPD7Q9NQZ7 604 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 CHST7Q9NS84 486 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 ARGLU1Q9NWB6 273 aaPredicted RBP10.65□□□□□ -0.7
APOC1-205ENST00000589781 ASNSD1Q9NWL6 643 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 PCSK1NQ9UHG2 260 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 CD207Q9UJ71 328 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 RAB21Q9UL25 225 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 FAN1Q9Y2M0 1017 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 HCFC2Q9Y5Z7 792 aa10.65□□□□□ -0.7
APOC1-205ENST00000589781 SF3B1O75533 1304 aaKnown RBP eCLIP10.64□□□□□ -0.71
APOC1-205ENST00000589781 LRRD1A4D1F6 860 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 SYN3O14994 580 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 TRUB2O95900 331 aaKnown RBP10.64□□□□□ -0.71
APOC1-205ENST00000589781 RARAP10276 462 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 RALAP11233 206 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 MIPP30301 263 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 SDC4P31431 198 aa10.64□□□□□ -0.71
APOC1-205ENST00000589781 SULT1E1P49888 294 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms