RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 SPATA17Q96L03 361 aa27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 SEPT5Q99719 369 aaPredicted RBP27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 AFF4Q9UHB7 1163 aaKnown RBP27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 STAP1Q9ULZ2 295 aa27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 RANBP2P49792 3224 aaKnown RBP27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 GREB1Q4ZG55 1949 aa27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 USP46P62068 366 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 SMC1AQ14683 1233 aaKnown RBP27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 LLGL1Q15334 1064 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 BEND5Q7L4P6 421 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 ZNF461Q8TAF7 563 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 EPC1Q9H2F5 836 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 SCML2Q9UQR0 700 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 CHD9Q3L8U1 2897 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 CEP290O15078 2479 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 FAM92AA1XBS5 289 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 CCDC188H7C350 402 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 RALAP11233 206 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 NCAM1P13591 858 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 PTPN7P35236 360 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 COPS2P61201 443 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 IFRD2Q12894 506 aaPredicted RBP27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 KLF1Q13351 362 aaPredicted RBP27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 TPGS2Q68CL5 300 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 SPOCD1Q6ZMY3 1216 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 GPR152Q8TDT2 470 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 TEKT4Q8WW24 435 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 OSBPL8Q9BZF1 889 aa27.17■■□□□ 1.94
SCAMP4-210ENST00000588555 LRRD1A4D1F6 860 aa27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 CAPN9O14815 690 aa27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 DNAJB2P25686 324 aa27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 PGFP49763 221 aa27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 RAB33AQ14088 237 aa27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 TAZQ16635 292 aa27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 BOLA3Q53S33 107 aa27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 C9orf50Q5SZB4 431 aa27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 ZFYVE27Q5T4F4 411 aa27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 SCYL2Q6P3W7 929 aa27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 SCD5Q86SK9 330 aa27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 EDEM1Q92611 657 aa27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 FBXO44Q9H4M3 255 aa27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 ANKZF1Q9H8Y5 726 aa27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 MRPL17Q9NRX2 175 aaKnown RBP27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 HSFX1Q9UBD0 423 aa27.16■■□□□ 1.94
SCAMP4-210ENST00000588555 CTSAP10619 480 aa27.15■■□□□ 1.94
SCAMP4-210ENST00000588555 ATF2P15336 505 aa27.15■■□□□ 1.94
SCAMP4-210ENST00000588555 ATF6P18850 670 aa27.15■■□□□ 1.94
SCAMP4-210ENST00000588555 KDELR1P24390 212 aa27.15■■□□□ 1.94
SCAMP4-210ENST00000588555 CDKN2BP42772 138 aa27.15■■□□□ 1.94
SCAMP4-210ENST00000588555 YWHAGP61981 247 aaKnown RBP eCLIP27.15■■□□□ 1.94
SCAMP4-210ENST00000588555 DENND5BQ6ZUT9 1274 aa27.15■■□□□ 1.94
SCAMP4-210ENST00000588555 GPR161Q8N6U8 529 aaKnown RBP27.15■■□□□ 1.94
SCAMP4-210ENST00000588555 PRELID2Q8N945 189 aa27.15■■□□□ 1.94
SCAMP4-210ENST00000588555 HSPH1Q92598 858 aa27.15■■□□□ 1.94
SCAMP4-210ENST00000588555 PGAP3Q96FM1 320 aaPredicted RBP27.15■■□□□ 1.94
SCAMP4-210ENST00000588555 RRN3Q9NYV6 651 aa27.15■■□□□ 1.94
SCAMP4-210ENST00000588555 FNIP2Q9P278 1114 aa27.15■■□□□ 1.94
SCAMP4-210ENST00000588555 CHD7Q9P2D1 2997 aa27.15■■□□□ 1.94
SCAMP4-210ENST00000588555 ZNF638Q14966 1978 aaKnown RBP27.15■■□□□ 1.94
SCAMP4-210ENST00000588555 M0QYT0 321 aa27.14■■□□□ 1.94
SCAMP4-210ENST00000588555 MDM4O15151 490 aa27.14■■□□□ 1.94
SCAMP4-210ENST00000588555 BMPR1AP36894 532 aa27.14■■□□□ 1.94
SCAMP4-210ENST00000588555 ARSEP51690 589 aa27.14■■□□□ 1.94
SCAMP4-210ENST00000588555 RPL10AP62906 217 aaKnown RBP27.14■■□□□ 1.94
SCAMP4-210ENST00000588555 KRT12Q99456 494 aa27.14■■□□□ 1.94
SCAMP4-210ENST00000588555 SNRNP25Q9BV90 132 aaKnown RBP27.14■■□□□ 1.94
SCAMP4-210ENST00000588555 TRIM62Q9BVG3 475 aa27.14■■□□□ 1.94
SCAMP4-210ENST00000588555 HEMGNQ9BXL5 484 aa27.14■■□□□ 1.94
SCAMP4-210ENST00000588555 RXFP1Q9HBX9 757 aa27.14■■□□□ 1.94
SCAMP4-210ENST00000588555 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.14■■□□□ 1.94
SCAMP4-210ENST00000588555 hCG_1818297A0A087WSY0 165 aa27.14■■□□□ 1.93
SCAMP4-210ENST00000588555 LINC01553A4QN01 128 aa27.14■■□□□ 1.93
SCAMP4-210ENST00000588555 DYNC1I1O14576 645 aa27.14■■□□□ 1.93
SCAMP4-210ENST00000588555 SEC24AO95486 1093 aa27.14■■□□□ 1.93
SCAMP4-210ENST00000588555 CD48P09326 243 aa27.14■■□□□ 1.93
SCAMP4-210ENST00000588555 RHOXF2BP0C7M4 288 aa27.14■■□□□ 1.93
SCAMP4-210ENST00000588555 PPP2R5EQ16537 467 aa27.14■■□□□ 1.93
SCAMP4-210ENST00000588555 CEP295NLQ96MC4 621 aa27.14■■□□□ 1.93
SCAMP4-210ENST00000588555 RHOXF2Q9BQY4 288 aa27.14■■□□□ 1.93
SCAMP4-210ENST00000588555 LRRC1Q9BTT6 524 aa27.14■■□□□ 1.93
SCAMP4-210ENST00000588555 DDX47Q9H0S4 455 aaKnown RBP27.14■■□□□ 1.93
SCAMP4-210ENST00000588555 NMUR1Q9HB89 426 aa27.14■■□□□ 1.93
SCAMP4-210ENST00000588555 PIGVQ9NUD9 493 aa27.14■■□□□ 1.93
SCAMP4-210ENST00000588555 STAU2Q9NUL3 570 aaKnown RBP eCLIP27.14■■□□□ 1.93
SCAMP4-210ENST00000588555 RTN3O95197 1032 aaPredicted RBP27.13■■□□□ 1.93
SCAMP4-210ENST00000588555 RDXP35241 583 aaKnown RBP27.13■■□□□ 1.93
SCAMP4-210ENST00000588555 MAGEA10P43363 369 aaPredicted RBP27.13■■□□□ 1.93
SCAMP4-210ENST00000588555 TUFMP49411 452 aaKnown RBP27.13■■□□□ 1.93
SCAMP4-210ENST00000588555 ADCY2Q08462 1091 aa27.13■■□□□ 1.93
SCAMP4-210ENST00000588555 TFDP3Q5H9I0 405 aa27.13■■□□□ 1.93
SCAMP4-210ENST00000588555 SLC7A14Q8TBB6 771 aa27.13■■□□□ 1.93
SCAMP4-210ENST00000588555 ABCC13Q9NSE7 274 aa27.13■■□□□ 1.93
SCAMP4-210ENST00000588555 GOLGA6L10A0A0M3HER8 536 aa27.12■■□□□ 1.93
SCAMP4-210ENST00000588555 CCDC85CA6NKD9 419 aa27.12■■□□□ 1.93
SCAMP4-210ENST00000588555 TEX28O15482 410 aa27.12■■□□□ 1.93
SCAMP4-210ENST00000588555 KRT10P13645 584 aa27.12■■□□□ 1.93
SCAMP4-210ENST00000588555 CETN2P41208 172 aa27.12■■□□□ 1.93
SCAMP4-210ENST00000588555 MTMR3Q13615 1198 aa27.12■■□□□ 1.93
SCAMP4-210ENST00000588555 CYP1B1Q16678 543 aa27.12■■□□□ 1.93
SCAMP4-210ENST00000588555 ODF2Q5BJF6 829 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms