RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 FBXO4Q9UKT5 387 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 SH3BP1Q9Y3L3 701 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 R4GN57 208 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 EP300Q09472 2414 aaPredicted RBP20.19■□□□□ 0.82
CIRBP-217ENST00000588230 OTOGLQ3ZCN5 2332 aa20.19■□□□□ 0.82
CIRBP-217ENST00000588230 SCAMP3O14828 347 aaKnown RBP20.18■□□□□ 0.82
CIRBP-217ENST00000588230 MED7O43513 233 aa20.18■□□□□ 0.82
CIRBP-217ENST00000588230 LETM1O95202 739 aaPredicted RBP20.18■□□□□ 0.82
CIRBP-217ENST00000588230 TBX18O95935 607 aa20.18■□□□□ 0.82
CIRBP-217ENST00000588230 ZBED1O96006 694 aa20.18■□□□□ 0.82
CIRBP-217ENST00000588230 TDGF1P13385 188 aa20.18■□□□□ 0.82
CIRBP-217ENST00000588230 ZNF528Q3MIS6 628 aa20.18■□□□□ 0.82
CIRBP-217ENST00000588230 PKDCCQ504Y2 493 aa20.18■□□□□ 0.82
CIRBP-217ENST00000588230 MAMSTRQ6ZN01 415 aa20.18■□□□□ 0.82
CIRBP-217ENST00000588230 SIX6OS1Q8N1H7 587 aa20.18■□□□□ 0.82
CIRBP-217ENST00000588230 ANKRD20A12PQ8NF67 263 aa20.18■□□□□ 0.82
CIRBP-217ENST00000588230 KCTD13Q8WZ19 329 aa20.18■□□□□ 0.82
CIRBP-217ENST00000588230 NELL1Q92832 810 aa20.18■□□□□ 0.82
CIRBP-217ENST00000588230 SECISBP2LQ93073 1101 aaKnown RBP20.18■□□□□ 0.82
CIRBP-217ENST00000588230 ULBP1Q9BZM6 244 aa20.18■□□□□ 0.82
CIRBP-217ENST00000588230 VPS16Q9H269 839 aa20.18■□□□□ 0.82
CIRBP-217ENST00000588230 LMAN1LQ9HAT1 526 aa20.18■□□□□ 0.82
CIRBP-217ENST00000588230 SIX2Q9NPC8 291 aa20.18■□□□□ 0.82
CIRBP-217ENST00000588230 E2F8A0AVK6 867 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 LAMTOR5O43504 91 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 NFATC1O95644 943 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 IRF1P10914 325 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 PTMSP20962 102 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 RGS7P49802 495 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 GOLGA8FQ08AF8 430 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 GOLGA8DPQ0D2H9 430 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 ADIGQ0VDE8 80 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 PON2Q15165 354 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 KRT31Q15323 416 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 PM20D1Q6GTS8 502 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 KLHDC10Q6PID8 442 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 SLC35F5Q8WV83 523 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 SHC3Q92529 594 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 NKD2Q969F2 451 aaPredicted RBP20.17■□□□□ 0.82
CIRBP-217ENST00000588230 ZFRQ96KR1 1074 aaKnown RBP20.17■□□□□ 0.82
CIRBP-217ENST00000588230 CDK5RAP1Q96SZ6 601 aaKnown RBP20.17■□□□□ 0.82
CIRBP-217ENST00000588230 RBM12Q9NTZ6 932 aaKnown RBP20.17■□□□□ 0.82
CIRBP-217ENST00000588230 TBC1D14Q9P2M4 693 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 DNMT3LQ9UJW3 386 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 NUDT5Q9UKK9 219 aa20.17■□□□□ 0.82
CIRBP-217ENST00000588230 BECN2A8MW95 431 aa20.16■□□□□ 0.82
CIRBP-217ENST00000588230 THAP12O43422 761 aa20.16■□□□□ 0.82
CIRBP-217ENST00000588230 LCP1P13796 627 aa20.16■□□□□ 0.82
CIRBP-217ENST00000588230 CDK11BP21127 795 aaKnown RBP20.16■□□□□ 0.82
CIRBP-217ENST00000588230 GNA15P30679 374 aa20.16■□□□□ 0.82
CIRBP-217ENST00000588230 YWHAGP61981 247 aaKnown RBP eCLIP20.16■□□□□ 0.82
CIRBP-217ENST00000588230 KCNMA1Q12791 1236 aa20.16■□□□□ 0.82
CIRBP-217ENST00000588230 CCINQ13939 588 aa20.16■□□□□ 0.82
CIRBP-217ENST00000588230 LRRC32Q14392 662 aa20.16■□□□□ 0.82
CIRBP-217ENST00000588230 KLHL40Q2TBA0 621 aa20.16■□□□□ 0.82
CIRBP-217ENST00000588230 ANO6Q4KMQ2 910 aa20.16■□□□□ 0.82
CIRBP-217ENST00000588230 FKBP15Q5T1M5 1219 aa20.16■□□□□ 0.82
CIRBP-217ENST00000588230 PMF1Q6P1K2 205 aa20.16■□□□□ 0.82
CIRBP-217ENST00000588230 RSRC2Q7L4I2 434 aaKnown RBP20.16■□□□□ 0.82
CIRBP-217ENST00000588230 ZNF276Q8N554 614 aa20.16■□□□□ 0.82
CIRBP-217ENST00000588230 ZNF606Q8WXB4 792 aa20.16■□□□□ 0.82
CIRBP-217ENST00000588230 EXOC4Q96A65 974 aa20.16■□□□□ 0.82
CIRBP-217ENST00000588230 KLF16Q9BXK1 252 aaPredicted RBP20.16■□□□□ 0.82
CIRBP-217ENST00000588230 MDM4O15151 490 aa20.15■□□□□ 0.82
CIRBP-217ENST00000588230 GJA4P35212 333 aa20.15■□□□□ 0.82
CIRBP-217ENST00000588230 CSTF1Q05048 431 aaKnown RBP20.15■□□□□ 0.82
CIRBP-217ENST00000588230 PTK2Q05397 1052 aa20.15■□□□□ 0.82
CIRBP-217ENST00000588230 DGKKQ5KSL6 1271 aa20.15■□□□□ 0.82
CIRBP-217ENST00000588230 BTBD8Q5XKL5 378 aa20.15■□□□□ 0.82
CIRBP-217ENST00000588230 SMYD5Q6GMV2 418 aa20.15■□□□□ 0.82
CIRBP-217ENST00000588230 TSSK4Q6SA08 328 aa20.15■□□□□ 0.82
CIRBP-217ENST00000588230 Q6ZS52 159 aa20.15■□□□□ 0.82
CIRBP-217ENST00000588230 ADGRG2Q8IZP9 1017 aa20.15■□□□□ 0.82
CIRBP-217ENST00000588230 NDRG1Q92597 394 aaKnown RBP20.15■□□□□ 0.82
CIRBP-217ENST00000588230 HSFY1Q96LI6 401 aa20.15■□□□□ 0.82
CIRBP-217ENST00000588230 IER2Q9BTL4 223 aa20.15■□□□□ 0.82
CIRBP-217ENST00000588230 LSM14BQ9BX40 385 aaKnown RBP20.15■□□□□ 0.82
CIRBP-217ENST00000588230 ACP6Q9NPH0 428 aa20.15■□□□□ 0.82
CIRBP-217ENST00000588230 CNGB3Q9NQW8 809 aa20.15■□□□□ 0.82
CIRBP-217ENST00000588230 AJAP1Q9UKB5 411 aaPredicted RBP20.15■□□□□ 0.82
CIRBP-217ENST00000588230 FOXN3O00409 490 aaPredicted RBP20.14■□□□□ 0.81
CIRBP-217ENST00000588230 EFEMP1Q12805 493 aa20.14■□□□□ 0.81
CIRBP-217ENST00000588230 GRSF1Q12849 480 aaKnown RBP eCLIP20.14■□□□□ 0.812e-8■■□□□ 12.5
CIRBP-217ENST00000588230 RAPGEF1Q13905 1077 aa20.14■□□□□ 0.81
CIRBP-217ENST00000588230 KLHDC7AQ5VTJ3 777 aa20.14■□□□□ 0.81
CIRBP-217ENST00000588230 DENND1BQ6P3S1 775 aa20.14■□□□□ 0.81
CIRBP-217ENST00000588230 MIB1Q86YT6 1006 aa20.14■□□□□ 0.81
CIRBP-217ENST00000588230 AOPEPQ8N6M6 819 aa20.14■□□□□ 0.81
CIRBP-217ENST00000588230 ZBTB44Q8NCP5 570 aa20.14■□□□□ 0.81
CIRBP-217ENST00000588230 OTUB2Q96DC9 234 aa20.14■□□□□ 0.81
CIRBP-217ENST00000588230 ST7Q9NRC1 585 aa20.14■□□□□ 0.81
CIRBP-217ENST00000588230 C2orf42Q9NWW7 574 aa20.14■□□□□ 0.81
CIRBP-217ENST00000588230 RASAL2Q9UJF2 1139 aa20.14■□□□□ 0.81
CIRBP-217ENST00000588230 LSM7Q9UK45 103 aaKnown RBP20.14■□□□□ 0.81
CIRBP-217ENST00000588230 PIK3R2O00459 728 aa20.13■□□□□ 0.81
CIRBP-217ENST00000588230 TRDMT1O14717 391 aaKnown RBP20.13■□□□□ 0.81
CIRBP-217ENST00000588230 COPB1P53618 953 aaKnown RBP20.13■□□□□ 0.81
CIRBP-217ENST00000588230 NCAPHQ15003 741 aa20.13■□□□□ 0.81
CIRBP-217ENST00000588230 DHCR24Q15392 516 aa20.13■□□□□ 0.81
CIRBP-217ENST00000588230 MEA1Q16626 185 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms