RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 MTRF1LQ9UGC7 380 aaKnown RBP17.24■□□□□ 0.35
NFIX-210ENST00000588228 ZNF148Q9UQR1 794 aa17.24■□□□□ 0.35
NFIX-210ENST00000588228 FAN1Q9Y2M0 1017 aa17.24■□□□□ 0.35
NFIX-210ENST00000588228 SF3B1O75533 1304 aaKnown RBP eCLIP17.24■□□□□ 0.359e-9■■■■■ 62.4
NFIX-210ENST00000588228 YJEFN3A6XGL0 299 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 TBKBP1A7MCY6 615 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 E7ENQ6 273 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 FYNP06241 537 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 USP17L7P0C7H9 530 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 RDXP35241 583 aaKnown RBP17.23■□□□□ 0.35
NFIX-210ENST00000588228 RFC2P35250 354 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 SLC11A1P49279 550 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 ATXN1P54253 815 aaKnown RBP17.23■□□□□ 0.35
NFIX-210ENST00000588228 OTUD4Q01804 1114 aaKnown RBP17.23■□□□□ 0.35
NFIX-210ENST00000588228 ELAVL2Q12926 359 aaKnown RBP17.23■□□□□ 0.35
NFIX-210ENST00000588228 MMRN1Q13201 1228 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 PKN2Q16513 984 aaKnown RBP17.23■□□□□ 0.35
NFIX-210ENST00000588228 HSP90B2PQ58FF3 399 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 VARS2Q5ST30 1063 aaKnown RBP17.23■□□□□ 0.35
NFIX-210ENST00000588228 OTUD1Q5VV17 481 aaPredicted RBP17.23■□□□□ 0.35
NFIX-210ENST00000588228 PM20D1Q6GTS8 502 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 CNKSR3Q6P9H4 555 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 HFE2Q6ZVN8 426 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 GSTA5Q7RTV2 222 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 TMC3Q7Z5M5 1100 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 PSTKQ8IV42 348 aaKnown RBP17.23■□□□□ 0.35
NFIX-210ENST00000588228 LRRC43Q8N309 656 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 ALLCQ8N6M5 410 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 ACTL9Q8TC94 416 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 SNF8Q96H20 258 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 RNF157Q96PX1 679 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 TMEM39AQ9NV64 488 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 GPATCH2LQ9NWQ4 482 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 MARCH5Q9NX47 278 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 RRN3Q9NYV6 651 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 CAPN9O14815 690 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 KRT14P02533 472 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 LTFP02788 710 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 CLTBP09497 229 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 ATF2P15336 505 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 FGFR3P22607 806 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 IL4RP24394 825 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 IVDP26440 423 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 KLRC2P26717 231 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 MTMR3Q13615 1198 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 IKBKEQ14164 716 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 MRPL58Q14197 206 aaKnown RBP17.23■□□□□ 0.35
NFIX-210ENST00000588228 NFE2Q16621 373 aaPredicted RBP17.23■□□□□ 0.35
NFIX-210ENST00000588228 CA9Q16790 459 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 SLC39A12Q504Y0 691 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 SPDYCQ5MJ68 293 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 BHLHA9Q7RTU4 235 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 BBOF1Q8ND07 529 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.23■□□□□ 0.35
NFIX-210ENST00000588228 FAF2Q96CS3 445 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 FUBP3Q96I24 572 aaKnown RBP eCLIP17.23■□□□□ 0.35
NFIX-210ENST00000588228 C11orf49Q9H6J7 331 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 CALCOCO1Q9P1Z2 691 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 AP4E1Q9UPM8 1137 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 USP3Q9Y6I4 520 aa17.23■□□□□ 0.35
NFIX-210ENST00000588228 OR6C75A6NL08 312 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 H3BQF6 201 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 M0QYT0 321 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 PPFIA2O75334 1257 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 GALTP07902 379 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 OR4Q2P0C623 313 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 HSPA8P11142 646 aaKnown RBP17.22■□□□□ 0.35
NFIX-210ENST00000588228 OAS2P29728 719 aaKnown RBP17.22■□□□□ 0.35
NFIX-210ENST00000588228 L1CAMP32004 1257 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 ADCY8P40145 1251 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 BCAR1P56945 870 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 CBX1P83916 185 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 CAV1Q03135 178 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 ANKRD20A8PQ5CZ79 823 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 CFAP58Q5T655 872 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 FAM171A1Q5VUB5 890 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 SYPL2Q5VXT5 272 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 ZNF280DQ6N043 979 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 IQCKQ8N0W5 287 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 CCDC185Q8N715 623 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 PGAP3Q96FM1 320 aaPredicted RBP17.22■□□□□ 0.35
NFIX-210ENST00000588228 TRIM62Q9BVG3 475 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 TXLNGYQ9BZA5 131 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 GPR62Q9BZJ7 368 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 DHX35Q9H5Z1 703 aaKnown RBP17.22■□□□□ 0.35
NFIX-210ENST00000588228 NAALADL1Q9UQQ1 740 aa17.22■□□□□ 0.35
NFIX-210ENST00000588228 AGPSO00116 658 aa17.21■□□□□ 0.35
NFIX-210ENST00000588228 TGM2P21980 687 aa17.21■□□□□ 0.35
NFIX-210ENST00000588228 HSD17B3P37058 310 aa17.21■□□□□ 0.35
NFIX-210ENST00000588228 GRIK1P39086 918 aa17.21■□□□□ 0.35
NFIX-210ENST00000588228 PITX1P78337 314 aaPredicted RBP17.21■□□□□ 0.35
NFIX-210ENST00000588228 DEUP1Q05D60 604 aa17.21■□□□□ 0.35
NFIX-210ENST00000588228 DHX9Q08211 1270 aaKnown RBP17.21■□□□□ 0.35
NFIX-210ENST00000588228 TRIP13Q15645 432 aaPredicted RBP17.21■□□□□ 0.35
NFIX-210ENST00000588228 CTXN3Q4LDR2 81 aa17.21■□□□□ 0.35
NFIX-210ENST00000588228 SLC9A4Q6AI14 798 aa17.21■□□□□ 0.35
NFIX-210ENST00000588228 FUT10Q6P4F1 479 aa17.21■□□□□ 0.35
NFIX-210ENST00000588228 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.21■□□□□ 0.35
NFIX-210ENST00000588228 BEND5Q7L4P6 421 aa17.21■□□□□ 0.35
NFIX-210ENST00000588228 FAM131BQ86XD5 332 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms