RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 LMO2P25791 158 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 CD6P30203 668 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 MATKP42679 507 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 NOP14P78316 857 aaKnown RBP9.09□□□□□ -0.95
SDF2-204ENST00000587338 MYO1EQ12965 1108 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 POSTNQ15063 836 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 STK38Q15208 465 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 MDH1BQ5I0G3 518 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 TDRD10Q5VZ19 366 aaKnown RBP9.09□□□□□ -0.95
SDF2-204ENST00000587338 CLEC17AQ6ZS10 378 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 HS2ST1Q7LGA3 356 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 TMEM25Q86YD3 366 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 BBS7Q8IWZ6 715 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 ZSWIM2Q8NEG5 633 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 CXorf38Q8TB03 319 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 BAHD1Q8TBE0 780 aaPredicted RBP9.09□□□□□ -0.95
SDF2-204ENST00000587338 RHBDD1Q8TEB9 315 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 SCFD1Q8WVM8 642 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 OTUB2Q96DC9 234 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 CALML4Q96GE6 196 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 TOE1Q96GM8 510 aaKnown RBP9.09□□□□□ -0.95
SDF2-204ENST00000587338 PCED1BQ96HM7 432 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 MRGPRX1Q96LB2 322 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 USP28Q96RU2 1077 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 CDC6Q99741 560 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 SCAND2PQ9GZW5 306 aaPredicted RBP9.09□□□□□ -0.95
SDF2-204ENST00000587338 CD248Q9HCU0 757 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 SPHK2Q9NRA0 654 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 SIX4Q9UIU6 781 aa9.09□□□□□ -0.95
SDF2-204ENST00000587338 KNTC1P50748 2209 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 GOLGA8IPA6NC78 632 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 GOLGA8JA6NMD2 632 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 NEDD8-MDP1E9PL57 170 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 TK2O00142 265 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 ATXN7O15265 892 aaPredicted RBP9.08□□□□□ -0.96
SDF2-204ENST00000587338 BCAT2O15382 392 aaPredicted RBP9.08□□□□□ -0.96
SDF2-204ENST00000587338 FLRT2O43155 660 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 COCHO43405 550 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 ZNF883P0CG24 379 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 NCAM1P13591 858 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 ITPKBP27987 946 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 UBA7P41226 1012 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 CACNA2D1P54289 1103 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 CAMK2BQ13554 666 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 HLA-BQ31612 363 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 RILPL1Q5EBL4 403 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 ATL3Q6DD88 541 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 IL27RAQ6UWB1 636 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 SFR1Q86XK3 245 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 PDCD7Q8N8D1 485 aaKnown RBP9.08□□□□□ -0.96
SDF2-204ENST00000587338 RAD54LQ92698 747 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 FBXO32Q969P5 355 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 HPDLQ96IR7 371 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 ZFRQ96KR1 1074 aaKnown RBP9.08□□□□□ -0.96
SDF2-204ENST00000587338 C8orf48Q96LL4 319 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 MMS19Q96T76 1030 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 GABRG3Q99928 467 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 GPR174Q9BXC1 333 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 NACA2Q9H009 215 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 ST6GALNAC4Q9H4F1 302 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 PDE11AQ9HCR9 933 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 BLOC1S4Q9NUP1 217 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.08□□□□□ -0.96
SDF2-204ENST00000587338 BTBD3Q9Y2F9 522 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 STARD13Q9Y3M8 1113 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 CLIC4Q9Y696 253 aa9.08□□□□□ -0.96
SDF2-204ENST00000587338 SHROOM3Q8TF72 1996 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 A0A1B0GVT2 93 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 WASH3PC4AMC7 463 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 PRRT4C9JH25 899 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 DKK1O94907 266 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 HLA-EP13747 358 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 TYRP14679 529 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 WARSP23381 471 aaKnown RBP9.07□□□□□ -0.96
SDF2-204ENST00000587338 YWHAQP27348 245 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 BNC1Q01954 994 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 KCNA1Q09470 495 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 STARD3Q14849 445 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 HECTD3Q5T447 861 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 DCAF12L1Q5VU92 463 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 ARL6IP4Q66PJ3 421 aaKnown RBP9.07□□□□□ -0.96
SDF2-204ENST00000587338 DPH6Q7L8W6 267 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 ZNF720Q7Z2F6 126 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 ZNF605Q86T29 641 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 CACUL1Q86Y37 369 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 PIP4P2Q8N4L2 257 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 KRI1Q8N9T8 703 aaKnown RBP9.07□□□□□ -0.96
SDF2-204ENST00000587338 PDZD8Q8NEN9 1154 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 MYCBPAPQ8TBZ2 947 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 DNASE2BQ8WZ79 361 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 SNX19Q92543 992 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 WBP2Q969T9 261 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 HVCN1Q96D96 273 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 ANKRD36BP1Q96IX9 119 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 XPO6Q96QU8 1125 aaKnown RBP9.07□□□□□ -0.96
SDF2-204ENST00000587338 BBS2Q9BXC9 721 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 TRIM9Q9C026 710 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 ZNF518BQ9C0D4 1074 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 SNX25Q9H3E2 840 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 CCSER2Q9H7U1 834 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms