RNA–Protein interactions for RNA: ENST00000586574.5

GIT1-215, Transcript of GIT ArfGAP 1, human

TSL 4

Gene GIT1, Length 576 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GIT1-215	ENST00000586574	GABRG3	Q99928	467 aa		11.3	□□□□□ -0.6
GIT1-215	ENST00000586574	KLF16	Q9BXK1	252 aa	Predicted RBP	11.3	□□□□□ -0.6
GIT1-215	ENST00000586574	SDCBP2	Q9H190	292 aa		11.3	□□□□□ -0.6
GIT1-215	ENST00000586574	VRTN	Q9H8Y1	702 aa		11.3	□□□□□ -0.6
GIT1-215	ENST00000586574	AGPAT3	Q9NRZ7	376 aa		11.3	□□□□□ -0.6
GIT1-215	ENST00000586574	GMIP	Q9P107	970 aa		11.3	□□□□□ -0.6
GIT1-215	ENST00000586574	CYP8B1	Q9UNU6	501 aa		11.3	□□□□□ -0.6
GIT1-215	ENST00000586574	GPSM3	Q9Y4H4	160 aa		11.3	□□□□□ -0.6
GIT1-215	ENST00000586574	ADAMTS20	P59510	1910 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	SMG1	Q96Q15	3661 aa	Known RBP	11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	VPS37C	A5D8V6	355 aa	Predicted RBP	11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	CLIC2	O15247	247 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	EIF3D	O15371	548 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	CACNG3	O60359	315 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	CBFA2T3	O75081	653 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	ZNF217	O75362	1048 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	TNNI1	P19237	187 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	ATXN3	P54252	364 aa	Predicted RBP	11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	SCAP	Q12770	1279 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	SLC14A1	Q13336	389 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	TRIP6	Q15654	476 aa	Known RBP	11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	ZNF423	Q2M1K9	1284 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	ANO4	Q32M45	955 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	BTBD8	Q5XKL5	378 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	TRMT11	Q7Z4G4	463 aa	Known RBP	11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	CCDC65	Q8IXS2	484 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	PNPLA1	Q8N8W4	532 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	SCFD1	Q8WVM8	642 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	ADAMTS14	Q8WXS8	1223 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	CCDC127	Q96BQ5	260 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	MRGPRX1	Q96LB2	322 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	HSPA12B	Q96MM6	686 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	SMYD3	Q9H7B4	428 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	OSER1	Q9NX31	292 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	MARK1	Q9P0L2	795 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	FBXO10	Q9UK96	956 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	SH3BP1	Q9Y3L3	701 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	RAD54B	Q9Y620	910 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	IGSF10	Q6WRI0	2623 aa		11.29	□□□□□ -0.6
GIT1-215	ENST00000586574	APC2	O95996	2303 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	TLR5	O60602	858 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	SYT1	P21579	422 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	MAOB	P27338	520 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	ATIC	P31939	592 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	TXLNA	P40222	546 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	CASP4	P49662	377 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	TNNC1	P63316	161 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	HNRNPD	Q14103	355 aa	Known RBP	11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	GRAMD4	Q6IC98	578 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	CNNM4	Q6P4Q7	775 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	RABEPK	Q7Z6M1	372 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	SLCO6A1	Q86UG4	719 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	CHPF	Q8IZ52	775 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	TNMD	Q9H2S6	317 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	CSNK1G1	Q9HCP0	422 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	DMAP1	Q9NPF5	467 aa	Predicted RBP	11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	DNAJC17	Q9NVM6	304 aa	Known RBP	11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	COMMD8	Q9NX08	183 aa		11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	NXF1	Q9UBU9	619 aa	Known RBP	11.28	□□□□□ -0.6
GIT1-215	ENST00000586574	HHLA1	C9JL84	531 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	NEDD8-MDP1	E9PL57	170 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	VNN1	O95497	513 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	C4BPA	P04003	597 aa	Known RBP	11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	SYP	P08247	313 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	FTH1P19	P0C7X4	201 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	IRF1	P10914	325 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	TYR	P14679	529 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	NASP	P49321	788 aa	Predicted RBP	11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	CYP2J2	P51589	502 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	CLDN10	P78369	228 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	BNC1	Q01954	994 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	ENPP2	Q13822	863 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	PLEKHG6	Q3KR16	790 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	PREPL	Q4J6C6	727 aa	Predicted RBP	11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	C19orf48	Q6RUI8	117 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	GPRIN1	Q7Z2K8	1008 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	GLRX5	Q86SX6	157 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	METTL3	Q86U44	580 aa	Known RBP	11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	C12orf56	Q8IXR9	622 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	CRYBG2	Q8N1P7	616 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	XXYLT1	Q8NBI6	393 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	DNASE2B	Q8WZ79	361 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	SYAP1	Q96A49	352 aa	Predicted RBP	11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	BBS2	Q9BXC9	721 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	NMUR1	Q9HB89	426 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	CYLD	Q9NQC7	956 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	CACNA2D2	Q9NY47	1150 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	ACACA	Q13085	2346 aa		11.27	□□□□□ -0.61
GIT1-215	ENST00000586574	KNL1	Q8NG31	2342 aa		11.26	□□□□□ -0.61
GIT1-215	ENST00000586574	LOC400499	M0QZD8	3231 aa		11.26	□□□□□ -0.61
GIT1-215	ENST00000586574	KCNJ18	B7U540	433 aa		11.26	□□□□□ -0.61
GIT1-215	ENST00000586574	GFRA2	O00451	464 aa		11.26	□□□□□ -0.61
GIT1-215	ENST00000586574	AP1G2	O75843	785 aa		11.26	□□□□□ -0.61
GIT1-215	ENST00000586574	CCDC130	P13994	396 aa		11.26	□□□□□ -0.61
GIT1-215	ENST00000586574	ACO1	P21399	889 aa	Known RBP	11.26	□□□□□ -0.61
GIT1-215	ENST00000586574	SNRPF	P62306	86 aa	Known RBP	11.26	□□□□□ -0.61
GIT1-215	ENST00000586574	GRIK2	Q13002	908 aa		11.26	□□□□□ -0.61
GIT1-215	ENST00000586574	TRPC3	Q13507	836 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms