RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 SOAT2O75908 522 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 ZDHHC11BP0C7U3 371 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 HMGA1P17096 107 aaKnown RBP13.52□□□□□ -0.25
TRIM47-202ENST00000585333 PSMA2P25787 234 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 PCK1P35558 622 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 ATP5C1P36542 298 aaKnown RBP13.52□□□□□ -0.25
TRIM47-202ENST00000585333 RNASE9P60153 205 aaKnown RBP13.52□□□□□ -0.25
TRIM47-202ENST00000585333 HYAL1Q12794 435 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 KCNC3Q14003 757 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 ARL13BQ3SXY8 428 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 DCAF6Q58WW2 860 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 HECTD3Q5T447 861 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 SDHAF4Q5VUM1 108 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 LLGL2Q6P1M3 1020 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 MSANTD2Q6P1R3 559 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 DAAM2Q86T65 1068 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 DDX42Q86XP3 938 aaKnown RBP eCLIP13.52□□□□□ -0.25
TRIM47-202ENST00000585333 SMG7Q92540 1137 aaKnown RBP13.52□□□□□ -0.25
TRIM47-202ENST00000585333 ARHGEF26Q96DR7 871 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 PGAP3Q96FM1 320 aaPredicted RBP13.52□□□□□ -0.25
TRIM47-202ENST00000585333 NECTIN4Q96NY8 510 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 DDX23Q9BUQ8 820 aaKnown RBP13.52□□□□□ -0.25
TRIM47-202ENST00000585333 LACRTQ9GZZ8 138 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 IGFLR1Q9H665 355 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 TRMT1Q9NXH9 659 aaKnown RBP13.52□□□□□ -0.25
TRIM47-202ENST00000585333 GMIPQ9P107 970 aa13.52□□□□□ -0.25
TRIM47-202ENST00000585333 RFXAPO00287 272 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 PIK3R2O00459 728 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 CCL16O15467 120 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 ATMINO43313 823 aaPredicted RBP13.51□□□□□ -0.25
TRIM47-202ENST00000585333 SPOPO43791 374 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 TLR5O60602 858 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 PROSCO94903 275 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 GABRR2P28476 465 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 RFC1P35251 1148 aaPredicted RBP13.51□□□□□ -0.25
TRIM47-202ENST00000585333 CETN2P41208 172 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 MTHFRP42898 656 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 COG7P83436 770 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 ADAM15Q13444 863 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 ODF2Q5BJF6 829 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 ATAT1Q5SQI0 421 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 ANKRD54Q6NXT1 300 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 REXO1L1PQ8IX06 675 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 UBL4BQ8N7F7 174 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 TPCN2Q8NHX9 752 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 GPR152Q8TDT2 470 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 RXFP2Q8WXD0 754 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 PABPC5Q96DU9 382 aaKnown RBP13.51□□□□□ -0.25
TRIM47-202ENST00000585333 TBCBQ99426 244 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 CORO1BQ9BR76 489 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 SMOC2Q9H3U7 446 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRIM47-202ENST00000585333 SLC12A6Q9UHW9 1150 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 DNMT3LQ9UJW3 386 aa13.51□□□□□ -0.25
TRIM47-202ENST00000585333 HBS1LQ9Y450 684 aaKnown RBP13.51□□□□□ -0.25
TRIM47-202ENST00000585333 TRAV19A0A0A6YYK7 116 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 A0A1W2PQH9 124 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 CCDC66A2RUB6 948 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 ZNF840PA6NDX5 716 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 GABBR2O75899 941 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 ABL1P00519 1130 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 RHOP08100 348 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 KRT7P08729 469 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 RARGP13631 454 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 RDXP35241 583 aaKnown RBP13.5□□□□□ -0.25
TRIM47-202ENST00000585333 SULT1E1P49888 294 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 ZNF135P52742 658 aaPredicted RBP13.5□□□□□ -0.25
TRIM47-202ENST00000585333 USP46P62068 366 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 MESDQ14696 234 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 COL19A1Q14993 1142 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 C2CD6Q53TS8 623 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 BRMS1LQ5PSV4 323 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 C10orf120Q5SQS8 335 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 LRRC38Q5VT99 294 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 PEX26Q7Z412 305 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 GPR149Q86SP6 731 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 PSTKQ8IV42 348 aaKnown RBP13.5□□□□□ -0.25
TRIM47-202ENST00000585333 DEFB106AQ8N104 65 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 NT5C3BQ969T7 300 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 ATXN3LQ9H3M9 355 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 FAM204AQ9H8W3 233 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 OSGEPQ9NPF4 335 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 TJP2Q9UDY2 1190 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 AMFRQ9UKV5 643 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 JRKLQ9Y4A0 524 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 ZFP37Q9Y6Q3 630 aaPredicted RBP13.5□□□□□ -0.25
TRIM47-202ENST00000585333 PLXNA3P51805 1871 aa13.5□□□□□ -0.25
TRIM47-202ENST00000585333 RCCD1A6NED2 376 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 PSTPIP1O43586 416 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 BUB1O43683 1085 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 PRPSAP2O60256 369 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 RFPL2O75678 378 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 APOEP02649 317 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 F11P03951 625 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 MYL4P12829 197 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 FLT3P36888 993 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 CDR1P51861 262 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 RPL7AP62424 266 aaKnown RBP13.49□□□□□ -0.25
TRIM47-202ENST00000585333 DEUP1Q05D60 604 aa13.49□□□□□ -0.25
TRIM47-202ENST00000585333 RING1Q06587 406 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms