RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 CAMK4Q16566 473 aa14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 ARHGAP17Q68EM7 881 aa14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 TTI2Q6NXR4 508 aa14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 CCDC186Q7Z3E2 898 aa14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 SCD5Q86SK9 330 aa14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 TADA2BQ86TJ2 420 aa14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 PIGZQ86VD9 579 aa14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 TTC30AQ86WT1 665 aa14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 TMEM25Q86YD3 366 aa14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 CAMKK1Q8N5S9 505 aa14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 FAM160A2Q8N612 972 aaPredicted RBP14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 GPR161Q8N6U8 529 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 USP33Q8TEY7 942 aa14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 GAB3Q8WWW8 586 aa14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 PARD6AQ9NPB6 346 aa14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 SPHK2Q9NRA0 654 aa14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 DNMT3LQ9UJW3 386 aa14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 LSM7Q9UK45 103 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-233ENST00000584186 TBC1D3BA6NDS4 549 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 AXIN1O15169 862 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TBXAS1P24557 533 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TIE1P35590 1138 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PSEN1P49768 467 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 CETN1Q12798 172 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PAK1Q13153 545 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 SGO2Q562F6 1265 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 EMC10Q5UCC4 262 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ALLCQ8N6M5 410 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ANKRD52Q8NB46 1076 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TSTD1Q8NFU3 115 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 NT5C1BQ96P26 610 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 FAM124BQ9H5Z6 455 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ZDHHC4Q9NPG8 344 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 DEC1Q9P2X7 70 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 HESX1Q9UBX0 185 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 RASAL2Q9UJF2 1139 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TSPAN16Q9UKR8 245 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 USP3Q9Y6I4 520 aa14.33□□□□□ -0.12
CDK5RAP3-233ENST00000584186 CCDC163A0A0D9SF12 145 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 NEDD8-MDP1E9PL57 170 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TULP2O00295 520 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TULP3O75386 442 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 KLF8O95600 359 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 HMBSP08397 361 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 EIF2DP41214 584 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 GRIA2P42262 883 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PLA2G4AP47712 749 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TKTL1P51854 596 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 DGKEP52429 567 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 UBE2HP62256 183 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 EFEMP1Q12805 493 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 RSPO4Q2I0M5 234 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ANO7Q6IWH7 933 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TMEM270Q6UE05 265 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TPGS1Q6ZTW0 290 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 HTR3DQ70Z44 454 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 RSRC2Q7L4I2 434 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 CACNA2D4Q7Z3S7 1137 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 KBTBD6Q86V97 674 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 CREBRFQ8IUR6 639 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PPM1KQ8N3J5 372 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TXNDC5Q8NBS9 432 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 UBA3Q8TBC4 463 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 BHMTQ93088 406 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 BBS2Q9BXC9 721 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 SRRTQ9BXP5 876 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 UBXN6Q9BZV1 441 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 CHMP5Q9NZZ3 219 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 INVSQ9Y283 1065 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PCDHB4Q9Y5E5 795 aa14.32□□□□□ -0.12
CDK5RAP3-233ENST00000584186 DCLK1O15075 740 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TRIM24O15164 1050 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 HOXC11O43248 304 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 GREM1O60565 184 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ZBED1O96006 694 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 VDRP11473 427 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TGM1P22735 817 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TNFRSF4P43489 277 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 BCAT1P54687 386 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 YWHAGP61981 247 aaKnown RBP eCLIP14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 MRPS21P82921 87 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 LMNB2Q03252 620 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PDE4CQ08493 712 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 KLHDC10Q6PID8 442 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 RRAGAQ7L523 313 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ARHGAP18Q8N392 663 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 NDRG1Q92597 394 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 KAT5Q92993 513 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 IPO9Q96P70 1041 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 CDK5RAP1Q96SZ6 601 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TPSD1Q9BZJ3 242 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ULBP1Q9BZM6 244 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 LRRC4Q9HBW1 653 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 SEMA4GQ9NTN9 838 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 DNAJC17Q9NVM6 304 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 CLIC5Q9NZA1 410 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 MMP17Q9ULZ9 603 aa14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms