RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 GOLGA1Q92805 767 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 NELL1Q92832 810 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 SUSD3Q96L08 255 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 HSFY1Q96LI6 401 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 SPATA6Q9NWH7 488 aaPredicted RBP12.55□□□□□ -0.4
GGA3-217ENST00000583667 ZSCAN32Q9NX65 697 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 HESX1Q9UBX0 185 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 IP6K2Q9UHH9 426 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 ANAPC7Q9UJX3 599 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 TMEM59LQ9UK28 342 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 NBEAQ8NFP9 2946 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 C1QTNF9BB2RNN3 333 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 KCNK3O14649 394 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 ZNF185O15231 689 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 CXCL14O95715 111 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 POMCP01189 267 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 C1QTNF9P0C862 333 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 ODC1P11926 461 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 PTPN1P18031 435 aaKnown RBP12.54□□□□□ -0.4
GGA3-217ENST00000583667 PBX3P40426 434 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 PIGHQ14442 188 aaPredicted RBP12.54□□□□□ -0.4
GGA3-217ENST00000583667 WSCD1Q658N2 575 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 DNAJC24Q6P3W2 148 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 KCNT2Q6UVM3 1135 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 DSTYKQ6XUX3 929 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 TTC30AQ86WT1 665 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 XYLT1Q86Y38 959 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 COLGALT2Q8IYK4 626 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 C12orf29Q8N999 325 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 KDF1Q8NAX2 398 aaPredicted RBP12.54□□□□□ -0.4
GGA3-217ENST00000583667 B3GALNT2Q8NCR0 500 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 LRRN4CLQ8ND94 238 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 C3orf58Q8NDZ4 430 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 SPATA4Q8NEY3 305 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 SLC22A17Q8WUG5 538 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 ANKRD7Q92527 254 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 CPXM1Q96SM3 734 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 ACBD6Q9BR61 282 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 ARHGEF3Q9NR81 526 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 GMEB2Q9UKD1 530 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 CDH9Q9ULB4 789 aa12.54□□□□□ -0.4
GGA3-217ENST00000583667 FNDC1Q4ZHG4 1894 aaPredicted RBP12.53□□□□□ -0.4
GGA3-217ENST00000583667 MAST4O15021 2626 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 M0QYV0 167 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 ATMINO43313 823 aaPredicted RBP12.53□□□□□ -0.4
GGA3-217ENST00000583667 B3GAT3O94766 335 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 KRT3P12035 628 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 PCSK1P29120 753 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 ACADSBP45954 432 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 BCAT1P54687 386 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 BST2Q10589 180 aaKnown RBP12.53□□□□□ -0.4
GGA3-217ENST00000583667 ORC1Q13415 861 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 PPP2R5EQ16537 467 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 ERCC6LQ2NKX8 1250 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 GOLGA7BQ2TAP0 167 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 GLE1Q53GS7 698 aaKnown RBP12.53□□□□□ -0.4
GGA3-217ENST00000583667 FAM171BQ6P995 826 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 RNF169Q8NCN4 708 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 IPO4Q8TEX9 1081 aaKnown RBP12.53□□□□□ -0.4
GGA3-217ENST00000583667 KCTD13Q8WZ19 329 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 NAP1L3Q99457 506 aaPredicted RBP12.53□□□□□ -0.4
GGA3-217ENST00000583667 NCAPGQ9BPX3 1015 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 GOLPH3Q9H4A6 298 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 TBC1D13Q9NVG8 400 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 SPG21Q9NZD8 308 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 PCDHB8Q9UN66 801 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 PACSIN2Q9UNF0 486 aaPredicted RBP12.53□□□□□ -0.4
GGA3-217ENST00000583667 DENND4AQ7Z401 1863 aa12.53□□□□□ -0.4
GGA3-217ENST00000583667 TARSL2A2RTX5 802 aaKnown RBP12.52□□□□□ -0.41
GGA3-217ENST00000583667 CASTOR2A6NHX0 329 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 CCDC188H7C350 402 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 XPO1O14980 1071 aaKnown RBP12.52□□□□□ -0.41
GGA3-217ENST00000583667 PSTPIP1O43586 416 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 TRAPPC3O43617 180 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 GDF9O60383 454 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 DDHD2O94830 711 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 OAZ2O95190 189 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 ERBB2P04626 1255 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 PDGFRBP09619 1106 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 IGFBP6P24592 240 aaPredicted RBP12.52□□□□□ -0.41
GGA3-217ENST00000583667 CXCR5P32302 372 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 PPM1AP35813 382 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 PLA2G4AP47712 749 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 RWDD2BP57060 319 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 STARD6P59095 220 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 PSMC1P62191 440 aaKnown RBP12.52□□□□□ -0.41
GGA3-217ENST00000583667 RING1Q06587 406 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 CCDC181Q5TID7 509 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 UNQ6494/PRO21346Q6UXR6 183 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 PAQR9Q6ZVX9 377 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 METTL23Q86XA0 190 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 FUKQ8N0W3 1084 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 UBA3Q8TBC4 463 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 MYCBPAPQ8TBZ2 947 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 ALG3Q92685 438 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 ZNF558Q96NG5 402 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 CASD1Q96PB1 797 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 PAAF1Q9BRP4 392 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 TMEM175Q9BSA9 504 aa12.52□□□□□ -0.41
GGA3-217ENST00000583667 DUSP16Q9BY84 665 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms