RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 TARDBPQ13148 414 aaKnown RBP eCLIP11.82□□□□□ -0.52
CASC3-208ENST00000583649 ILKQ13418 452 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 KIF19Q2TAC6 998 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 PKDCCQ504Y2 493 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 CENPQQ7L2Z9 268 aaPredicted RBP11.82□□□□□ -0.52
CASC3-208ENST00000583649 HS2ST1Q7LGA3 356 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 TMEM25Q86YD3 366 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 GTF3C6Q969F1 213 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 MYLPFQ96A32 169 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 PKMYT1Q99640 499 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 HNRNPABQ99729 332 aaKnown RBP11.82□□□□□ -0.52
CASC3-208ENST00000583649 ELOVL4Q9GZR5 314 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 DNMT3LQ9UJW3 386 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 BTBD3Q9Y2F9 522 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 HEMK1Q9Y5R4 338 aaPredicted RBP11.82□□□□□ -0.52
CASC3-208ENST00000583649 SNX11Q9Y5W9 270 aa11.82□□□□□ -0.52
CASC3-208ENST00000583649 HELZP42694 1942 aaKnown RBP11.82□□□□□ -0.52
CASC3-208ENST00000583649 ZNF462Q96JM2 2506 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 GABRDO14764 452 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 YKT6O15498 198 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 LDHAP00338 332 aaKnown RBP11.81□□□□□ -0.52
CASC3-208ENST00000583649 TYRP14679 529 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 ABCB4P21439 1286 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 TUBP50607 506 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 SLC12A3P55017 1021 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 CDH8P55286 799 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 GUCY1B3Q02153 619 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 ARID5AQ03989 594 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 IFRD2Q12894 506 aaPredicted RBP11.81□□□□□ -0.52
CASC3-208ENST00000583649 FUT11Q495W5 492 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 MIB1Q86YT6 1006 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 TMPRSS6Q8IU80 811 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 BBS7Q8IWZ6 715 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 SPACA3Q8IXA5 215 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 NUP93Q8N1F7 819 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 NECAB1Q8N987 351 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 NSUN7Q8NE18 718 aaKnown RBP11.81□□□□□ -0.52
CASC3-208ENST00000583649 ERLEC1Q96DZ1 483 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 ACOX2Q99424 681 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 ACE2Q9BYF1 805 aaPredicted RBP11.81□□□□□ -0.52
CASC3-208ENST00000583649 GMIPQ9P107 970 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 EXOC7Q9UPT5 735 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 STON1Q9Y6Q2 735 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 TCHHQ07283 1943 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 ATP8B3O60423 1300 aa11.81□□□□□ -0.52
CASC3-208ENST00000583649 F8VP50 259 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 PAPSS1O43252 624 aaPredicted RBP11.8□□□□□ -0.52
CASC3-208ENST00000583649 COCHO43405 550 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 IGLV3-19P01714 112 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 ITGAVP06756 1048 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 TMEM191BP0C7N4 346 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 PLCG1P19174 1290 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 PCBP4P57723 403 aaKnown RBP11.8□□□□□ -0.52
CASC3-208ENST00000583649 USP46P62068 366 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 GTF2BQ00403 316 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 TBC1D25Q3MII6 688 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 HES3Q5TGS1 186 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 LSMEM2Q8N112 164 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 MYCBPAPQ8TBZ2 947 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 FBXO32Q969P5 355 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 MED8Q96G25 268 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 CNDP2Q96KP4 475 aaKnown RBP11.8□□□□□ -0.52
CASC3-208ENST00000583649 FAM117AQ9C073 453 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 SLC6A17Q9H1V8 727 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 SNX25Q9H3E2 840 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 CD248Q9HCU0 757 aa11.8□□□□□ -0.52
CASC3-208ENST00000583649 ANK1P16157 1881 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 PP2D1A8MPX8 630 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 SLC26A4O43511 780 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 BRINP1O60477 761 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 DTNBO60941 627 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 BCAT1P54687 386 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 PSMC1P62191 440 aaKnown RBP11.79□□□□□ -0.52
CASC3-208ENST00000583649 SOWAHAQ2M3V2 549 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 HYIQ5T013 277 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 PRICKLE2Q7Z3G6 844 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 KCNK18Q7Z418 384 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 CACTIN-AS1Q8N1I8 211 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 C4orf32Q8N8J7 132 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 C1orf127Q8N9H9 656 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 HVCN1Q96D96 273 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 CALML4Q96GE6 196 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 PCED1BQ96HM7 432 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 ANKRD36BP1Q96IX9 119 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 ZFRQ96KR1 1074 aaKnown RBP11.79□□□□□ -0.52
CASC3-208ENST00000583649 ZNF578Q96N58 590 aaPredicted RBP11.79□□□□□ -0.52
CASC3-208ENST00000583649 MMS19Q96T76 1030 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 REEP2Q9BRK0 252 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 CD93Q9NPY3 652 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 RBAKQ9NYW8 714 aaPredicted RBP11.79□□□□□ -0.52
CASC3-208ENST00000583649 MARK1Q9P0L2 795 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 NXF1Q9UBU9 619 aaKnown RBP11.79□□□□□ -0.52
CASC3-208ENST00000583649 CLCA2Q9UQC9 943 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 STYXL1Q9Y6J8 313 aa11.79□□□□□ -0.52
CASC3-208ENST00000583649 GOLGA4Q13439 2230 aaKnown RBP11.78□□□□□ -0.52
CASC3-208ENST00000583649 SCN1AP35498 2009 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 PRRT4C9JH25 899 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 ATP2C2O75185 946 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 TNNC2P02585 160 aa11.78□□□□□ -0.52
CASC3-208ENST00000583649 PDGFRBP09619 1106 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms