RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 NEK8Q86SG6 692 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 CCAR1Q8IX12 1150 aaKnown RBP4.29□□□□□ -1.72
VAPA-206ENST00000583475 SUN3Q8TAQ9 357 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 ZNF398Q8TD17 642 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 FYTTD1Q96QD9 318 aaKnown RBP4.29□□□□□ -1.72
VAPA-206ENST00000583475 GDF15Q99988 308 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 HEYLQ9NQ87 328 aaPredicted RBP4.29□□□□□ -1.72
VAPA-206ENST00000583475 SNX15Q9NRS6 342 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 MYO1AQ9UBC5 1043 aa4.29□□□□□ -1.72
VAPA-206ENST00000583475 ZNF804BA4D1E1 1349 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 ANO9A1A5B4 782 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 CDK4P11802 303 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 SFPQP23246 707 aaKnown RBP eCLIP4.28□□□□□ -1.72
VAPA-206ENST00000583475 KELP23276 732 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 RBL1P28749 1068 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 EPHB2P29323 1055 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 EIF4A1P60842 406 aaKnown RBP4.28□□□□□ -1.72
VAPA-206ENST00000583475 CFHR3Q02985 330 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 IFIT5Q13325 482 aaKnown RBP4.28□□□□□ -1.72
VAPA-206ENST00000583475 DAZAP2Q15038 168 aaPredicted RBP4.28□□□□□ -1.72
VAPA-206ENST00000583475 ACOX1Q15067 660 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 SUPT20HL1Q3ZLR7 823 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 C4orf46Q504U0 113 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 DENND2CQ68D51 928 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 ZNF626Q68DY1 528 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 GRHL2Q6ISB3 625 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 SLC18B1Q6NT16 456 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 CRTC1Q6UUV9 634 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 KSR2Q6VAB6 950 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 BEND5Q7L4P6 421 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 YTHDF3Q7Z739 585 aaKnown RBP4.28□□□□□ -1.72
VAPA-206ENST00000583475 GALNT16Q8N428 558 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 CCDC33Q8N5R6 958 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 C12orf76Q8N812 135 aaPredicted RBP4.28□□□□□ -1.72
VAPA-206ENST00000583475 MAFAQ8NHW3 353 aaPredicted RBP4.28□□□□□ -1.72
VAPA-206ENST00000583475 MBD3L2Q8NHZ7 208 aaPredicted RBP4.28□□□□□ -1.72
VAPA-206ENST00000583475 EDC3Q96F86 508 aaKnown RBP4.28□□□□□ -1.72
VAPA-206ENST00000583475 LRRC46Q96FV0 321 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 PRR11Q96HE9 360 aaPredicted RBP4.28□□□□□ -1.72
VAPA-206ENST00000583475 ZC3H10Q96K80 434 aaKnown RBP4.28□□□□□ -1.72
VAPA-206ENST00000583475 SLC25A32Q9H2D1 315 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 ZBTB26Q9HCK0 441 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 STARD7Q9NQZ5 370 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 BTBD3Q9Y2F9 522 aa4.28□□□□□ -1.72
VAPA-206ENST00000583475 WDR17Q8IZU2 1322 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 SMIM35A0A1B0GVV1 85 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 APOL1O14791 398 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 CA12O43570 354 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 CBFA2T3O75081 653 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 GCATO75600 419 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 MYL3P08590 195 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 TMEM225BP0DP42 221 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 ARP10275 920 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 GPC5P78333 572 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 EZH2Q15910 746 aaKnown RBP4.27□□□□□ -1.73
VAPA-206ENST00000583475 ST3GAL2Q16842 350 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 CERKLQ49MI3 558 aaPredicted RBP4.27□□□□□ -1.73
VAPA-206ENST00000583475 AWAT1Q58HT5 328 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 FAM209BQ5JX69 171 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 TMEM63BQ5T3F8 832 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 ABLIM2Q6H8Q1 611 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 HIBCHQ6NVY1 386 aaPredicted RBP4.27□□□□□ -1.73
VAPA-206ENST00000583475 ZNF813Q6ZN06 617 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 C1QL2Q7Z5L3 287 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 C11orf96Q7Z7L8 435 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 FSTL5Q8N475 847 aaPredicted RBP4.27□□□□□ -1.73
VAPA-206ENST00000583475 PNPLA1Q8N8W4 532 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 PNISRQ8TF01 805 aaKnown RBP4.27□□□□□ -1.73
VAPA-206ENST00000583475 VPS50Q96JG6 964 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 ZNF778Q96MU6 729 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 C1QTNF7Q9BXJ2 289 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 MAGEB5Q9BZ81 275 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 SLC29A3Q9BZD2 475 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 ZCWPW1Q9H0M4 648 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 ARNT2Q9HBZ2 717 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 PDGFCQ9NRA1 345 aa4.27□□□□□ -1.73
VAPA-206ENST00000583475 ZMYND8Q9ULU4 1186 aaPredicted RBP4.27□□□□□ -1.73
VAPA-206ENST00000583475 CYP2D7A0A087X1C5 515 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 CLIC1O00299 241 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 FCHO1O14526 889 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 PRAMEF2O60811 474 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 CAND2O75155 1236 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 COQ9O75208 318 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 USP1O94782 785 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 WDR47O94967 919 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 MYL4P12829 197 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 ADRA1DP25100 572 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 GABRB3P28472 473 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 PBX1P40424 430 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 TM4SF4P48230 202 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 DNASE1L3Q13609 305 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 LARS2Q15031 903 aaKnown RBP4.26□□□□□ -1.73
VAPA-206ENST00000583475 ARL13BQ3SXY8 428 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 AASDHQ4L235 1098 aaPredicted RBP4.26□□□□□ -1.73
VAPA-206ENST00000583475 HSP90AB2PQ58FF8 381 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 MEX3CQ5U5Q3 659 aaKnown RBP4.26□□□□□ -1.73
VAPA-206ENST00000583475 RAP1GAP2Q684P5 730 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 ZNF425Q6IV72 752 aa4.26□□□□□ -1.73
VAPA-206ENST00000583475 TMEM65Q6PI78 240 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms