RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 CCSER2Q9H7U1 834 aa16.06■□□□□ 0.16
IFT20-212ENST00000582797 UPF2Q9HAU5 1272 aaKnown RBP16.06■□□□□ 0.16
IFT20-212ENST00000582797 RBAKQ9NYW8 714 aaPredicted RBP16.06■□□□□ 0.16
IFT20-212ENST00000582797 EIF2B4Q9UI10 523 aaKnown RBP16.06■□□□□ 0.16
IFT20-212ENST00000582797 PCDHGB2Q9Y5G2 931 aa16.06■□□□□ 0.16
IFT20-212ENST00000582797 SLCO1B1Q9Y6L6 691 aa16.06■□□□□ 0.16
IFT20-212ENST00000582797 A0A1B0GVT2 93 aa16.05■□□□□ 0.16
IFT20-212ENST00000582797 GOLGA8IPA6NC78 632 aa16.05■□□□□ 0.16
IFT20-212ENST00000582797 GOLGA8JA6NMD2 632 aa16.05■□□□□ 0.16
IFT20-212ENST00000582797 NEDD8-MDP1E9PL57 170 aa16.05■□□□□ 0.16
IFT20-212ENST00000582797 TLX3O43711 291 aaPredicted RBP16.05■□□□□ 0.16
IFT20-212ENST00000582797 HLA-EP13747 358 aa16.05■□□□□ 0.16
IFT20-212ENST00000582797 ABCD1P33897 745 aa16.05■□□□□ 0.16
IFT20-212ENST00000582797 CLDN6P56747 220 aa16.05■□□□□ 0.16
IFT20-212ENST00000582797 RBP5P82980 135 aa16.05■□□□□ 0.16
IFT20-212ENST00000582797 MAPRE1Q15691 268 aaKnown RBP16.05■□□□□ 0.16
IFT20-212ENST00000582797 IL27RAQ6UWB1 636 aa16.05■□□□□ 0.16
IFT20-212ENST00000582797 HS2ST1Q7LGA3 356 aa16.05■□□□□ 0.16
IFT20-212ENST00000582797 FAM184AQ8NB25 1140 aa16.05■□□□□ 0.16
IFT20-212ENST00000582797 SCFD1Q8WVM8 642 aa16.05■□□□□ 0.16
IFT20-212ENST00000582797 LLPHQ9BRT6 129 aaKnown RBP16.05■□□□□ 0.16
IFT20-212ENST00000582797 ST6GALNAC4Q9H4F1 302 aa16.05■□□□□ 0.16
IFT20-212ENST00000582797 PDE11AQ9HCR9 933 aa16.05■□□□□ 0.16
IFT20-212ENST00000582797 CHORDC1Q9UHD1 332 aaPredicted RBP16.05■□□□□ 0.16
IFT20-212ENST00000582797 NFE2L3Q9Y4A8 694 aa16.05■□□□□ 0.16
IFT20-212ENST00000582797 PTPRJQ12913 1337 aa16.04■□□□□ 0.16
IFT20-212ENST00000582797 J3QKU1 62 aa16.04■□□□□ 0.16
IFT20-212ENST00000582797 DDIT3P35638 169 aa16.04■□□□□ 0.16
IFT20-212ENST00000582797 EIF2S3P41091 472 aaKnown RBP16.04■□□□□ 0.16
IFT20-212ENST00000582797 POSTNQ15063 836 aa16.04■□□□□ 0.16
IFT20-212ENST00000582797 PTPRNQ16849 979 aa16.04■□□□□ 0.16
IFT20-212ENST00000582797 FUT11Q495W5 492 aa16.04■□□□□ 0.16
IFT20-212ENST00000582797 SFR1Q86XK3 245 aa16.04■□□□□ 0.16
IFT20-212ENST00000582797 CADM4Q8NFZ8 388 aa16.04■□□□□ 0.16
IFT20-212ENST00000582797 C1orf216Q8TAB5 229 aa16.04■□□□□ 0.16
IFT20-212ENST00000582797 NOC3LQ8WTT2 800 aaKnown RBP16.04■□□□□ 0.16
IFT20-212ENST00000582797 HPDLQ96IR7 371 aa16.04■□□□□ 0.16
IFT20-212ENST00000582797 KIF2CQ99661 725 aa16.04■□□□□ 0.16
IFT20-212ENST00000582797 MRPL45Q9BRJ2 306 aaKnown RBP16.04■□□□□ 0.16
IFT20-212ENST00000582797 ZNF518BQ9C0D4 1074 aa16.04■□□□□ 0.16
IFT20-212ENST00000582797 MKRN2Q9H000 416 aaKnown RBP16.04■□□□□ 0.16
IFT20-212ENST00000582797 GMIPQ9P107 970 aa16.04■□□□□ 0.16
IFT20-212ENST00000582797 USP36Q9P275 1121 aaKnown RBP16.04■□□□□ 0.16
IFT20-212ENST00000582797 PLXNA2O75051 1894 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 METTL12A8MUP2 240 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 CLDN5O00501 218 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 KCNK3O14649 394 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 TNFSF14O43557 240 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 CACNG3O60359 315 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 PPP1R37O75864 691 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 TMEM191BP0C7N4 346 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 TYRP14679 529 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 WARSP23381 471 aaKnown RBP16.03■□□□□ 0.16
IFT20-212ENST00000582797 YWHAQP27348 245 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 CSNK1EP49674 416 aaKnown RBP16.03■□□□□ 0.16
IFT20-212ENST00000582797 TPMTP51580 245 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 SEMG2Q02383 582 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 KIF19Q2TAC6 998 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 HECTD3Q5T447 861 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 PCSK4Q6UW60 755 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 DPH6Q7L8W6 267 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 ZNF720Q7Z2F6 126 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 CACUL1Q86Y37 369 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 LSM14AQ8ND56 463 aaKnown RBP16.03■□□□□ 0.16
IFT20-212ENST00000582797 OR5B17Q8NGF7 314 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 RAD54LQ92698 747 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 FBXO32Q969P5 355 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 NXPE2Q96DL1 559 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 BBS2Q9BXC9 721 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 ITM2CQ9NQX7 267 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 SNX11Q9Y5W9 270 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 STON1Q9Y6Q2 735 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 COL6A6A6NMZ7 2263 aa16.03■□□□□ 0.16
IFT20-212ENST00000582797 HMGN5P82970 282 aaKnown RBP16.02■□□□□ 0.16
IFT20-212ENST00000582797 CFHR1Q03591 330 aa16.02■□□□□ 0.16
IFT20-212ENST00000582797 LRRC69Q6ZNQ3 347 aa16.02■□□□□ 0.16
IFT20-212ENST00000582797 TPGS1Q6ZTW0 290 aa16.02■□□□□ 0.16
IFT20-212ENST00000582797 METTL3Q86U44 580 aaKnown RBP16.02■□□□□ 0.16
IFT20-212ENST00000582797 NUP93Q8N1F7 819 aa16.02■□□□□ 0.16
IFT20-212ENST00000582797 PDZD8Q8NEN9 1154 aa16.02■□□□□ 0.16
IFT20-212ENST00000582797 SCAMP5Q8TAC9 235 aa16.02■□□□□ 0.16
IFT20-212ENST00000582797 CALML4Q96GE6 196 aa16.02■□□□□ 0.16
IFT20-212ENST00000582797 XPO6Q96QU8 1125 aaKnown RBP16.02■□□□□ 0.16
IFT20-212ENST00000582797 MMS19Q96T76 1030 aa16.02■□□□□ 0.16
IFT20-212ENST00000582797 DPEP3Q9H4B8 488 aa16.02■□□□□ 0.16
IFT20-212ENST00000582797 COL5A1P20908 1838 aaPredicted RBP16.02■□□□□ 0.16
IFT20-212ENST00000582797 E9PAM4 449 aa16.01■□□□□ 0.15
IFT20-212ENST00000582797 PYCARD-AS1I3L0S3 204 aa16.01■□□□□ 0.15
IFT20-212ENST00000582797 GREM1O60565 184 aa16.01■□□□□ 0.15
IFT20-212ENST00000582797 UBA7P41226 1012 aa16.01■□□□□ 0.15
IFT20-212ENST00000582797 GRK6P43250 576 aa16.01■□□□□ 0.15
IFT20-212ENST00000582797 DGKGP49619 791 aa16.01■□□□□ 0.15
IFT20-212ENST00000582797 PGFP49763 221 aa16.01■□□□□ 0.15
IFT20-212ENST00000582797 STARD3Q14849 445 aa16.01■□□□□ 0.15
IFT20-212ENST00000582797 SUZ12Q15022 739 aaKnown RBP16.01■□□□□ 0.15
IFT20-212ENST00000582797 LAYNQ6UX15 382 aa16.01■□□□□ 0.15
IFT20-212ENST00000582797 SNX19Q92543 992 aa16.01■□□□□ 0.15
IFT20-212ENST00000582797 BHMTQ93088 406 aa16.01■□□□□ 0.15
IFT20-212ENST00000582797 HVCN1Q96D96 273 aa16.01■□□□□ 0.15
IFT20-212ENST00000582797 P2RY11Q96G91 374 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms