RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 PSEN2P49810 448 aa14.23□□□□□ -0.13
SRSF1-205ENST00000582730 NCALDP61601 193 aa14.23□□□□□ -0.13
SRSF1-205ENST00000582730 IRX1P78414 480 aaPredicted RBP14.23□□□□□ -0.13
SRSF1-205ENST00000582730 FAM47CQ5HY64 1035 aa14.23□□□□□ -0.13
SRSF1-205ENST00000582730 TWF2Q6IBS0 349 aaKnown RBP14.23□□□□□ -0.13
SRSF1-205ENST00000582730 LRRC52Q8N7C0 313 aa14.23□□□□□ -0.13
SRSF1-205ENST00000582730 FBF1Q8TES7 1133 aa14.23□□□□□ -0.13
SRSF1-205ENST00000582730 SLC35F5Q8WV83 523 aa14.23□□□□□ -0.13
SRSF1-205ENST00000582730 FAM149B1Q96BN6 582 aa14.23□□□□□ -0.13
SRSF1-205ENST00000582730 COX16Q9P0S2 106 aa14.23□□□□□ -0.13
SRSF1-205ENST00000582730 DERAQ9Y315 318 aa14.23□□□□□ -0.13
SRSF1-205ENST00000582730 SPTLC1O15269 473 aa14.23□□□□□ -0.13
SRSF1-205ENST00000582730 FGFR1P11362 822 aa14.23□□□□□ -0.13
SRSF1-205ENST00000582730 IL9RQ01113 521 aa14.23□□□□□ -0.13
SRSF1-205ENST00000582730 RNASELQ05823 741 aaKnown RBP14.23□□□□□ -0.13
SRSF1-205ENST00000582730 BOLA3Q53S33 107 aa14.23□□□□□ -0.13
SRSF1-205ENST00000582730 SLC2A14Q8TDB8 520 aa14.23□□□□□ -0.13
SRSF1-205ENST00000582730 PCDH18Q9HCL0 1135 aa14.23□□□□□ -0.13
SRSF1-205ENST00000582730 PSMC3IPQ9P2W1 217 aaPredicted RBP14.23□□□□□ -0.13
SRSF1-205ENST00000582730 A0A1W2PPM1 405 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 GOLGA8RI6L899 631 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 SNX3O60493 162 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 ALADP13716 330 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 RBL1P28749 1068 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 SNX16P57768 344 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 YWHAGP61981 247 aaKnown RBP eCLIP14.22□□□□□ -0.13
SRSF1-205ENST00000582730 CDC42EP1Q00587 391 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 MAP2K5Q13163 448 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 ZBTB6Q15916 424 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 CCDC142Q17RM4 750 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 PLD5Q8N7P1 536 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 APPL2Q8NEU8 664 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 SLC4A5Q9BY07 1137 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 AP5M1Q9H0R1 490 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 EURLQ9NYK6 297 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 GEMIN4P57678 1058 aaKnown RBP14.22□□□□□ -0.13
SRSF1-205ENST00000582730 NR1H3Q13133 447 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 TAF1CQ15572 869 aaPredicted RBP14.22□□□□□ -0.13
SRSF1-205ENST00000582730 TMEM110Q86TL2 294 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 NDRG1Q92597 394 aaKnown RBP14.22□□□□□ -0.13
SRSF1-205ENST00000582730 ZNF560Q96MR9 790 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 KLF6Q99612 283 aaPredicted RBP14.22□□□□□ -0.13
SRSF1-205ENST00000582730 MAGEB5Q9BZ81 275 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 ECT2Q9H8V3 914 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 CNTN3Q9P232 1028 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 GNEQ9Y223 722 aaKnown RBP14.22□□□□□ -0.13
SRSF1-205ENST00000582730 USP15Q9Y4E8 981 aaPredicted RBP14.22□□□□□ -0.13
SRSF1-205ENST00000582730 DOCK3Q8IZD9 2030 aa14.22□□□□□ -0.13
SRSF1-205ENST00000582730 IGF2BP3O00425 579 aaKnown RBP eCLIP14.21□□□□□ -0.13
SRSF1-205ENST00000582730 AVILO75366 819 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 GABBR2O75899 941 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 CD4P01730 458 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 SETSIPP0DME0 302 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 ACAT1P24752 427 aaKnown RBP14.21□□□□□ -0.13
SRSF1-205ENST00000582730 STIP1P31948 543 aaKnown RBP14.21□□□□□ -0.13
SRSF1-205ENST00000582730 ELK3P41970 407 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 BCAT1P54687 386 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 HDAC4P56524 1084 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 HUNKP57058 714 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 BST2Q10589 180 aaKnown RBP14.21□□□□□ -0.13
SRSF1-205ENST00000582730 SEPT7Q16181 437 aaKnown RBP14.21□□□□□ -0.13
SRSF1-205ENST00000582730 PKDCCQ504Y2 493 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 ARMC2Q8NEN0 867 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 PCDH19Q8TAB3 1148 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 PAFAH2Q99487 392 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 UBN1Q9NPG3 1134 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 CACNG4Q9UBN1 327 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 A8MUI8 341 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 HUS1O60921 280 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 SUN1O94901 812 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 ATP2A2P16615 1042 aaKnown RBP14.21□□□□□ -0.13
SRSF1-205ENST00000582730 MSH2P43246 934 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 TAF6P49848 677 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 WDR4P57081 412 aaKnown RBP14.21□□□□□ -0.13
SRSF1-205ENST00000582730 SOX4Q06945 474 aaPredicted RBP14.21□□□□□ -0.13
SRSF1-205ENST00000582730 PDK2Q15119 407 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 UNC93AQ86WB7 457 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 KIF2BQ8N4N8 673 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 KBTBD7Q8WVZ9 684 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 SPOCK2Q92563 424 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 CFAP36Q96G28 342 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 RABGEF1Q9UJ41 708 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 ACTL7BQ9Y614 415 aa14.21□□□□□ -0.13
SRSF1-205ENST00000582730 UNCXA6NJT0 531 aa14.21□□□□□ -0.14
SRSF1-205ENST00000582730 F5H423 210 aaPredicted RBP14.21□□□□□ -0.14
SRSF1-205ENST00000582730 APRTP07741 180 aa14.21□□□□□ -0.14
SRSF1-205ENST00000582730 KRT4P19013 534 aa14.21□□□□□ -0.14
SRSF1-205ENST00000582730 RPA3P35244 121 aaPredicted RBP14.21□□□□□ -0.14
SRSF1-205ENST00000582730 DNAJC3Q13217 504 aa14.21□□□□□ -0.14
SRSF1-205ENST00000582730 SPATA21Q7Z572 469 aa14.21□□□□□ -0.14
SRSF1-205ENST00000582730 ADGRF2Q8IZF7 708 aa14.21□□□□□ -0.14
SRSF1-205ENST00000582730 PQLC3Q8N755 202 aa14.21□□□□□ -0.14
SRSF1-205ENST00000582730 CCDC110Q8TBZ0 833 aa14.21□□□□□ -0.14
SRSF1-205ENST00000582730 ZNF483Q8TF39 744 aaPredicted RBP14.21□□□□□ -0.14
SRSF1-205ENST00000582730 KHSRPQ92945 711 aaKnown RBP eCLIP14.21□□□□□ -0.141e-17■■■□□ 16.3
SRSF1-205ENST00000582730 MAGEB18Q96M61 343 aa14.21□□□□□ -0.14
SRSF1-205ENST00000582730 WDR83Q9BRX9 315 aaKnown RBP14.21□□□□□ -0.14
SRSF1-205ENST00000582730 RRAGCQ9HB90 399 aa14.21□□□□□ -0.14
SRSF1-205ENST00000582730 IKBKGQ9Y6K9 419 aa14.21□□□□□ -0.14
SRSF1-205ENST00000582730 MBLAC1A4D2B0 266 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms