RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 ASB7Q9H672 318 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ETNK1Q9HBU6 452 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ANLNQ9NQW6 1124 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ASNSD1Q9NWL6 643 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 BAIAP2L1Q9UHR4 511 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ITGA11Q9UKX5 1188 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PHTF1Q9UMS5 762 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SLC12A4Q9UP95 1085 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ZSWIM8A7E2V4 1837 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SMIM28A0A1B0GU29 152 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CCDC78A2IDD5 438 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 F8W810 466 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CYB561D2O14569 222 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CELF2O95319 508 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CBX6O95503 412 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 GRM5P41594 1212 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ABCG1P45844 678 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ARL4CP56559 192 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 COPS2P61201 443 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 YWHAZP63104 245 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ELF3P78545 371 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TAP1Q03518 808 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 DGKDQ16760 1214 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PKDCCQ504Y2 493 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 DENND5BQ6ZUT9 1274 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CEP57Q86XR8 500 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PPM1NQ8N819 430 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 BBOF1Q8ND07 529 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SLC35F5Q8WV83 523 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SMC6Q96SB8 1091 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CCDC77Q9BR77 488 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 VTA1Q9NP79 307 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SHOC2Q9UQ13 582 aa11.13□□□□□ -0.63
CDK5RAP3-225ENST00000582482 EIF4E1BA6NMX2 242 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SRRM3A6NNA2 597 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 MAGEB2O15479 319 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TYROBPO43914 113 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PYGBP11216 843 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 VAV1P15498 845 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CYP2F1P24903 491 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SDC4P31431 198 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TTC3P53804 2025 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 BCAR1P56945 870 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 GEMIN4P57678 1058 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 LMNB2Q03252 620 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 NME3Q13232 169 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SYPL2Q5VXT5 272 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TLK2Q86UE8 772 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CAND1Q86VP6 1230 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 HACE1Q8IYU2 909 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 MZB1Q8WU39 189 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TTC17Q96AE7 1141 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 MAGEB18Q96M61 343 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 FAM111AQ96PZ2 611 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 NFKBIZQ9BYH8 718 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ACSS2Q9NR19 701 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 MTMR10Q9NXD2 777 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SEPT10Q9P0V9 454 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 MAD1L1Q9Y6D9 718 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ATXN2Q99700 1313 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 I6L893 689 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 TCEA3O75764 348 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PTPN7P35236 360 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SLC6A3Q01959 620 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ADIGQ0VDE8 80 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 GRB14Q14449 540 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 KCNJ11Q14654 390 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 GPR162Q16538 588 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ACCSLQ4AC99 568 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 LACTB2Q53H82 288 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 EFHC2Q5JST6 749 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SLC27A1Q6PCB7 646 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 OTOAQ7RTW8 1153 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 GPRIN1Q7Z2K8 1008 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SPATS2Q86XZ4 545 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 KIRREL3Q8IZU9 778 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ERP27Q96DN0 273 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 KCNK16Q96T55 309 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 SLC13A1Q9BZW2 595 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 KDM4CQ9H3R0 1056 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PSMC3IPQ9P2W1 217 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ZMYND8Q9ULU4 1186 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CHKBQ9Y259 395 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 NUP205Q92621 2012 aa11.12□□□□□ -0.63
CDK5RAP3-225ENST00000582482 FAM72CH0Y354 149 aa11.11□□□□□ -0.63
CDK5RAP3-225ENST00000582482 APOL1O14791 398 aa11.11□□□□□ -0.63
CDK5RAP3-225ENST00000582482 USP12O75317 370 aa11.11□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ZBED1O96006 694 aa11.11□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CSH1P0DML2 217 aa11.11□□□□□ -0.63
CDK5RAP3-225ENST00000582482 CSH2P0DML3 217 aa11.11□□□□□ -0.63
CDK5RAP3-225ENST00000582482 GNL1P36915 607 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PTK7Q13308 1070 aa11.11□□□□□ -0.63
CDK5RAP3-225ENST00000582482 UBXN11Q5T124 520 aa11.11□□□□□ -0.63
CDK5RAP3-225ENST00000582482 FAM72AQ5TYM5 149 aa11.11□□□□□ -0.63
CDK5RAP3-225ENST00000582482 HHATQ5VTY9 493 aa11.11□□□□□ -0.63
CDK5RAP3-225ENST00000582482 FAM72DQ6L9T8 149 aa11.11□□□□□ -0.63
CDK5RAP3-225ENST00000582482 ARHGEF18Q6ZSZ5 1173 aa11.11□□□□□ -0.63
CDK5RAP3-225ENST00000582482 FAM72BQ86X60 149 aa11.11□□□□□ -0.63
CDK5RAP3-225ENST00000582482 RELL1Q8IUW5 271 aa11.11□□□□□ -0.63
CDK5RAP3-225ENST00000582482 PARP9Q8IXQ6 854 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms